| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is rhlE [H]
Identifier: 59711751
GI number: 59711751
Start: 1267371
End: 1268666
Strand: Direct
Name: rhlE [H]
Synonym: VF_1144
Alternate gene names: 59711751
Gene position: 1267371-1268666 (Clockwise)
Preceding gene: 59711750
Following gene: 59711752
Centisome position: 43.74
GC content: 40.51
Gene sequence:
>1296_bases ATGTCATTTTCATCTCAAGGTTTTGCACCTGAAATCGTAAAAGCATTAACTGAATGTGGTTATCAAAAACTGACCCCAAT TCAACAAAAGGCTATTCCTTTAGCACGTAAAGGTCATGATATTCTGGCGAATGCTCAAACGGGTACAGGTAAAACTGCTG CGTTTGCATTACCAGTTATTCAACAATTATTAGATTCTAAGAAATCAGCAACTCGTCGTACTGCACGAGCGTTGATCCTT GCTCCAACTCGTGAGCTAGCAGAGCAAATCGCAGTAAATATTGCTGATTACATTAAATACACATCATTGACAGTAACTTC TGTGTTTGGTGGTAAAAAAATGTCATCTCAAGAGCGTGCTCTAGAGCCGGGTGTTGATATTTTGGTGGCAACCCCGGGTC GTCTTCAAGAGCACATCGAAGAAGAAAACGTATCTATCGCTAACCTTGAATTTTTGGTTTTTGATGAAGCAGATCGTATG TTAGATATGGGCTTTGTTAATGCGATCCGTAATATCATGATGGAAGTAAATACGTCTCCACAAATCATGCTGTTCTCGGC AACGTCTTCTGCTCAAATGAACAAGCTAGCGAGTGATATCTTACGTAAACCAAAACGTATCTCAGTTGATCCTGAAAACA CAACTGCATCAACCATTGCACACGTTGTTTACCCAGTAGATGAAGAGCGTAAAACAGAGCTTCTTTCTGAGCTGATTGGT CGTAAAAATTGGCAACAAGTGCTGGTGTTTGTGAACTACAAAGAAACAGCAAATGAGATCGTAAAAGAATTAAAACTGGA CGGTATTAAAGCGGTTCTTTGTCATGGTGATAAAGCACAGAGTGCTCGTCGTCGTGCATTAGAAGAGTTTAAAGAAGGCA AAGCACGCGTTATGGTTGCTACGGATGTTGCAGCTCGTGGTCTTGATATTGCTGATTTACCTCATGTGATTAACTATGAC ATGCCTTTCTTAGCCGAAGATTATGTTCACCGTATTGGCCGTACAGGCCGTGCTGGTAAAAAAGGTCATGCAGTTTCGTT TGTTAGCCGTGAAGAAGAGCTAACTGTGGTTCAAGTTGAAACATTGATTCAACAGCGTATTCGCCGTGTTGAACAACCGG GTTATGAGCCTAAGAACCGTGATGCTTACATTGATAAAGTAAACACGAAATCGGCATTTAAAAATCGTAAAGGTCGTACA AACAATCCAAATGAAGATCAATCTTCAGCTGAGCGTCGTATGCGTTTGAAGAATGTGATTCAAAATAAAGCACGCATTAC TAAATTGAAGAAGTAG
Upstream 100 bases:
>100_bases TAAATATGAAAAAATGTGCGCTAACTCACCGTAAATCATCTATAATGCGCGGCTAAATTAATAATGAATACATAGACTGT TTGCTTAAGGAATCCACTTT
Downstream 100 bases:
>100_bases GGCTGAATTATGCAACGTGATTATACTTTTTCTTGTTTGGTAACTATGCCACGTCATGAGCTAGAAGAATTTAGCCACCG TGTCGTTAGCCGTATGGTTC
Product: DNA and RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSFSSQGFAPEIVKALTECGYQKLTPIQQKAIPLARKGHDILANAQTGTGKTAAFALPVIQQLLDSKKSATRRTARALIL APTRELAEQIAVNIADYIKYTSLTVTSVFGGKKMSSQERALEPGVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRM LDMGFVNAIRNIMMEVNTSPQIMLFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAHVVYPVDEERKTELLSELIG RKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMVATDVAARGLDIADLPHVINYD MPFLAEDYVHRIGRTGRAGKKGHAVSFVSREEELTVVQVETLIQQRIRRVEQPGYEPKNRDAYIDKVNTKSAFKNRKGRT NNPNEDQSSAERRMRLKNVIQNKARITKLKK
Sequences:
>Translated_431_residues MSFSSQGFAPEIVKALTECGYQKLTPIQQKAIPLARKGHDILANAQTGTGKTAAFALPVIQQLLDSKKSATRRTARALIL APTRELAEQIAVNIADYIKYTSLTVTSVFGGKKMSSQERALEPGVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRM LDMGFVNAIRNIMMEVNTSPQIMLFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAHVVYPVDEERKTELLSELIG RKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMVATDVAARGLDIADLPHVINYD MPFLAEDYVHRIGRTGRAGKKGHAVSFVSREEELTVVQVETLIQQRIRRVEQPGYEPKNRDAYIDKVNTKSAFKNRKGRT NNPNEDQSSAERRMRLKNVIQNKARITKLKK >Mature_430_residues SFSSQGFAPEIVKALTECGYQKLTPIQQKAIPLARKGHDILANAQTGTGKTAAFALPVIQQLLDSKKSATRRTARALILA PTRELAEQIAVNIADYIKYTSLTVTSVFGGKKMSSQERALEPGVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRML DMGFVNAIRNIMMEVNTSPQIMLFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAHVVYPVDEERKTELLSELIGR KNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMVATDVAARGLDIADLPHVINYDM PFLAEDYVHRIGRTGRAGKKGHAVSFVSREEELTVVQVETLIQQRIRRVEQPGYEPKNRDAYIDKVNTKSAFKNRKGRTN NPNEDQSSAERRMRLKNVIQNKARITKLKK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=38.4831460674157, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=38.4831460674157, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=38.728323699422, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=38.7464387464387, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=38.7464387464387, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=37.3297002724796, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI262118318, Length=441, Percent_Identity=34.0136054421769, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI216548263, Length=441, Percent_Identity=34.0136054421769, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI262231852, Length=441, Percent_Identity=34.0136054421769, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI13518015, Length=421, Percent_Identity=34.6793349168646, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI224593278, Length=356, Percent_Identity=38.7640449438202, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI301171475, Length=347, Percent_Identity=40.6340057636888, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI87196351, Length=347, Percent_Identity=40.6340057636888, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI301171467, Length=347, Percent_Identity=40.6340057636888, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI169881239, Length=347, Percent_Identity=40.0576368876081, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI13514809, Length=347, Percent_Identity=40.0576368876081, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=38.6301369863014, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=33.6734693877551, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=38.375350140056, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=35.2601156069364, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=37.1014492753623, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI7661920, Length=352, Percent_Identity=33.8068181818182, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=34.8051948051948, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=35.9773371104816, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=35.9773371104816, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=33.6, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI164664518, Length=387, Percent_Identity=31.7829457364341, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=34.1145833333333, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=34.1463414634146, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI83700235, Length=363, Percent_Identity=34.7107438016529, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI31542656, Length=375, Percent_Identity=33.6, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI38569503, Length=366, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI38569505, Length=366, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI38327634, Length=353, Percent_Identity=33.9943342776204, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI41327779, Length=366, Percent_Identity=34.1530054644809, Blast_Score=188, Evalue=7e-48, Organism=Homo sapiens, GI41327776, Length=375, Percent_Identity=32.2666666666667, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI21040371, Length=368, Percent_Identity=30.9782608695652, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=30.0546448087432, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=30.0546448087432, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI256223453, Length=361, Percent_Identity=33.2409972299169, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI13514831, Length=370, Percent_Identity=31.6216216216216, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI9506931, Length=476, Percent_Identity=28.1512605042017, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=30.8823529411765, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=30.2872062663185, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=30.0261096605744, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=30.6849315068493, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI154759257, Length=412, Percent_Identity=28.6407766990291, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=32.3699421965318, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=29.3956043956044, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI256773275, Length=412, Percent_Identity=29.3689320388349, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI62241024, Length=347, Percent_Identity=30.5475504322767, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=32.8313253012048, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=37.5, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI284005309, Length=374, Percent_Identity=22.4598930481283, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=50.5291005291005, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1790214, Length=370, Percent_Identity=41.8918918918919, Blast_Score=271, Evalue=6e-74, Organism=Escherichia coli, GI87082221, Length=376, Percent_Identity=37.7659574468085, Blast_Score=268, Evalue=7e-73, Organism=Escherichia coli, GI1788930, Length=358, Percent_Identity=41.0614525139665, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI1787605, Length=344, Percent_Identity=39.2441860465116, Blast_Score=234, Evalue=1e-62, Organism=Caenorhabditis elegans, GI115533224, Length=345, Percent_Identity=40.8695652173913, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=36.7724867724868, Blast_Score=248, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=40.495867768595, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=40.495867768595, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=40.495867768595, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI86570094, Length=387, Percent_Identity=37.7260981912145, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=37.8917378917379, Blast_Score=227, Evalue=9e-60, Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=36.0526315789474, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI17507877, Length=375, Percent_Identity=36, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=36.8852459016393, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17537549, Length=412, Percent_Identity=33.7378640776699, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=36, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=31.8801089918256, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI71995724, Length=352, Percent_Identity=34.9431818181818, Blast_Score=220, Evalue=9e-58, Organism=Caenorhabditis elegans, GI17507121, Length=352, Percent_Identity=34.6590909090909, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552642, Length=354, Percent_Identity=36.4406779661017, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507881, Length=378, Percent_Identity=34.9206349206349, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=36.2573099415205, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71999646, Length=348, Percent_Identity=33.6206896551724, Blast_Score=201, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71999644, Length=348, Percent_Identity=33.6206896551724, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=30.5177111716621, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=31.9480519480519, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI115532548, Length=400, Percent_Identity=33, Blast_Score=188, Evalue=4e-48, Organism=Caenorhabditis elegans, GI193208216, Length=409, Percent_Identity=32.518337408313, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=33.6842105263158, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=34.9431818181818, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17505370, Length=395, Percent_Identity=30.379746835443, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=34.9614395886889, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=31.4207650273224, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI71990816, Length=363, Percent_Identity=33.6088154269972, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=34.9333333333333, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17556951, Length=356, Percent_Identity=31.4606741573034, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=28.7153652392947, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=28.7153652392947, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI25148203, Length=427, Percent_Identity=26.6978922716628, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=28.7917737789203, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=27.5, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=28.0597014925373, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17553716, Length=377, Percent_Identity=25.1989389920424, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=28.3783783783784, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71982862, Length=225, Percent_Identity=31.1111111111111, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25148205, Length=351, Percent_Identity=25.3561253561254, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=41.8367346938776, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17566630, Length=344, Percent_Identity=26.7441860465116, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17565430, Length=389, Percent_Identity=23.9074550128535, Blast_Score=81, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6324778, Length=397, Percent_Identity=38.5390428211587, Blast_Score=262, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=370, Percent_Identity=40, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=39.5480225988701, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6321856, Length=372, Percent_Identity=38.4408602150538, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=341, Percent_Identity=40.4692082111437, Blast_Score=239, Evalue=7e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=380, Percent_Identity=37.6315789473684, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6320449, Length=399, Percent_Identity=34.5864661654135, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6320224, Length=373, Percent_Identity=31.0991957104558, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6320041, Length=350, Percent_Identity=32.2857142857143, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=375, Percent_Identity=32.2666666666667, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=346, Percent_Identity=34.971098265896, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=30.8788598574822, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=352, Percent_Identity=34.375, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=31.4207650273224, Blast_Score=189, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6322912, Length=351, Percent_Identity=33.048433048433, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322323, Length=351, Percent_Identity=33.048433048433, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=383, Percent_Identity=28.9817232375979, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=402, Percent_Identity=31.592039800995, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=29.7082228116711, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=376, Percent_Identity=30.5851063829787, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=29.9212598425197, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=29.2270531400966, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.007299270073, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=27.972027972028, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=365, Percent_Identity=27.9452054794521, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=37.7049180327869, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=38.9830508474576, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=38.5269121813031, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=37.0786516853933, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=38.0555555555556, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI24642151, Length=355, Percent_Identity=38.5915492957746, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI17985987, Length=350, Percent_Identity=40.2857142857143, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=36.6233766233766, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=37.4331550802139, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=36.7231638418079, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=36.7123287671233, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24583281, Length=395, Percent_Identity=29.620253164557, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24583279, Length=395, Percent_Identity=29.620253164557, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24645031, Length=352, Percent_Identity=33.5227272727273, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI28575014, Length=365, Percent_Identity=34.7945205479452, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24585582, Length=435, Percent_Identity=31.7241379310345, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.5384615384615, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=32.1525885558583, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=32.1525885558583, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=32.1525885558583, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=32.1525885558583, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI17136814, Length=387, Percent_Identity=35.1421188630491, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=32.2404371584699, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=32.2404371584699, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=32.2404371584699, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24666101, Length=353, Percent_Identity=33.4277620396601, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=31.1614730878187, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=31.1614730878187, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI20130173, Length=448, Percent_Identity=28.5714285714286, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=31.9034852546917, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24642822, Length=381, Percent_Identity=32.5459317585302, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=29.8429319371728, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI19920478, Length=387, Percent_Identity=29.9741602067183, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI17136666, Length=421, Percent_Identity=29.2161520190024, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI17647335, Length=339, Percent_Identity=28.9085545722714, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=30.3680981595092, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI18859659, Length=230, Percent_Identity=34.3478260869565, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI28571338, Length=230, Percent_Identity=34.3478260869565, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=26.2857142857143, Blast_Score=125, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48242; Mature: 48111
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSSQGFAPEIVKALTECGYQKLTPIQQKAIPLARKGHDILANAQTGTGKTAAFALPVI CCCCCCCCCHHHHHHHHHCCCHHCCCHHHHCCCHHHCCCCEEEECCCCCCCHHHHHHHHH QQLLDSKKSATRRTARALILAPTRELAEQIAVNIADYIKYTSLTVTSVFGGKKMSSQERA HHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCHHHH LEPGVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNIMMEVNTSP CCCCCEEEEECCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC QIMLFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAHVVYPVDEERKTELLSELIG CEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC RKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMVA CCCCEEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEE TDVAARGLDIADLPHVINYDMPFLAEDYVHRIGRTGRAGKKGHAVSFVSREEELTVVQVE ECHHHCCCCHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHH TLIQQRIRRVEQPGYEPKNRDAYIDKVNTKSAFKNRKGRTNNPNEDQSSAERRMRLKNVI HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH QNKARITKLKK HHHHHHHHCCC >Mature Secondary Structure SFSSQGFAPEIVKALTECGYQKLTPIQQKAIPLARKGHDILANAQTGTGKTAAFALPVI CCCCCCCCHHHHHHHHHCCCHHCCCHHHHCCCHHHCCCCEEEECCCCCCCHHHHHHHHH QQLLDSKKSATRRTARALILAPTRELAEQIAVNIADYIKYTSLTVTSVFGGKKMSSQERA HHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCHHHH LEPGVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNIMMEVNTSP CCCCCEEEEECCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC QIMLFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAHVVYPVDEERKTELLSELIG CEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC RKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMVA CCCCEEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEE TDVAARGLDIADLPHVINYDMPFLAEDYVHRIGRTGRAGKKGHAVSFVSREEELTVVQVE ECHHHCCCCHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHH TLIQQRIRRVEQPGYEPKNRDAYIDKVNTKSAFKNRKGRTNNPNEDQSSAERRMRLKNVI HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH QNKARITKLKK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]