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The map label for this gene is ygaW [H]

Identifier: 59711574

GI number: 59711574

Start: 1059803

End: 1060255

Strand: Direct

Name: ygaW [H]

Synonym: VF_0967

Alternate gene names: 59711574

Gene position: 1059803-1060255 (Clockwise)

Preceding gene: 59711572

Following gene: 59711575

Centisome position: 36.58

GC content: 39.51

Gene sequence:

>453_bases
ATGTCTAAGAAAGGGCCATTTAATATCCGCAATGCTGCGGCTGATACATTTGCAATGGTGGTTTTTTGTTTTATTACGGG
CATGTTTATTGAAATATTAATTTCAGGAATGACATTTGAGCAGTCGTTGGCTTCTCGAACTCTTTCCATACCAGTTAACA
TCGCAATCGCATGGCCTTATGGGGTTTTTCGTGATTTTATGCTTCGTCAAGGTGCTCGTATATCACCAAGCAAATTCATG
AAGAATATTGCAGACTTAGTTGCGTATGTGACATTCCAGTCGCCAGCTTACGCTATGATTTTATTAGTCGTGGGGGCAAC
ACCAGAGCAAATCATTACTGCTGTTTCAAGTAATGTTGTTGTCTCATGTGTAATGGGTGTGTTTTATGGTTACTTTTTAG
ATGCTTGCCGTAAAGCATTTAAAGTTCCTGGTTACTACACACCACAAGCATAA

Upstream 100 bases:

>100_bases
ATAATTGCTAGTTAGATCTACCTGTCTAGTTCATTCCACTGGATGTATTTCATCATCCAGTCCATTAGTCTGATATTTGT
GTGTTGGAGAGAGTAAGTTA

Downstream 100 bases:

>100_bases
GTATAAACTTTTATGTTATAGATAAAGCCAGCATATAATTATGTTGGCTTTTTTGTTTATAACACGAGCAAGACGTGTAA
AAATGAAGCAACCAATTGAG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSKKGPFNIRNAAADTFAMVVFCFITGMFIEILISGMTFEQSLASRTLSIPVNIAIAWPYGVFRDFMLRQGARISPSKFM
KNIADLVAYVTFQSPAYAMILLVVGATPEQIITAVSSNVVVSCVMGVFYGYFLDACRKAFKVPGYYTPQA

Sequences:

>Translated_150_residues
MSKKGPFNIRNAAADTFAMVVFCFITGMFIEILISGMTFEQSLASRTLSIPVNIAIAWPYGVFRDFMLRQGARISPSKFM
KNIADLVAYVTFQSPAYAMILLVVGATPEQIITAVSSNVVVSCVMGVFYGYFLDACRKAFKVPGYYTPQA
>Mature_149_residues
SKKGPFNIRNAAADTFAMVVFCFITGMFIEILISGMTFEQSLASRTLSIPVNIAIAWPYGVFRDFMLRQGARISPSKFMK
NIADLVAYVTFQSPAYAMILLVVGATPEQIITAVSSNVVVSCVMGVFYGYFLDACRKAFKVPGYYTPQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789025, Length=143, Percent_Identity=59.4405594405594, Blast_Score=183, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010574
- ProDom:   PD090021 [H]

Pfam domain/function: PF06610 DUF1144 [H]

EC number: NA

Molecular weight: Translated: 16513; Mature: 16382

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKGPFNIRNAAADTFAMVVFCFITGMFIEILISGMTFEQSLASRTLSIPVNIAIAWPY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEECCEEEEEECCH
GVFRDFMLRQGARISPSKFMKNIADLVAYVTFQSPAYAMILLVVGATPEQIITAVSSNVV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
VSCVMGVFYGYFLDACRKAFKVPGYYTPQA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKKGPFNIRNAAADTFAMVVFCFITGMFIEILISGMTFEQSLASRTLSIPVNIAIAWPY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEECCEEEEEECCH
GVFRDFMLRQGARISPSKFMKNIADLVAYVTFQSPAYAMILLVVGATPEQIITAVSSNVV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
VSCVMGVFYGYFLDACRKAFKVPGYYTPQA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]