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The map label for this gene is pbpX [H]

Identifier: 59711575

GI number: 59711575

Start: 1061178

End: 1062233

Strand: Direct

Name: pbpX [H]

Synonym: VF_0968

Alternate gene names: 59711575

Gene position: 1061178-1062233 (Clockwise)

Preceding gene: 59711574

Following gene: 59711576

Centisome position: 36.62

GC content: 38.35

Gene sequence:

>1056_bases
ATGAATACTGTTAAATTTAAACAAAATGTTAAGTTTTTTACCCTACTGCTAAGTCTGTGTTTATTACTAAGTGGTTGCAG
AAACAACTTGGTACCCTTTACGAAAGGACAGTCAGTTGATCAATATGTTGATAGTCTAAGTTTTAGTGGCGCAGTTTTAA
TTGTTGATCAAGGGGAAATAGTATTGAGCAAAGGTGTTGGTTTAGTTGATCGCAAGGGAACTGAAACTATTAATGCAGAT
ACTGTTTTCCGCTTAGGCTCTGTAAGTAAACAATTTACTGCCACTGCAATTTTGCTGTTACAGCAAAAAGGTTTATTGAA
TATCGATGAGCCGGTTGCCACTTATTTACCTGATTTTCCACATGGGGATATCATCAGCATCAAAAATTTACTTCAACATA
CCTCTGGTATTCCTAATTATACTGAGTTCAAAAATTTTGGCGTGATAGCAACTCAATATCACAGCCCAGCTCAATTAGTT
GCCATGTTTAAGGATTTACCGTTAGAGTTTACCCCCGGTACTCGTTTTAACTACTCTAATTCAGGTTATGTTTTGTTAGG
TTATTTAATAGAGGTTGTCAGCGGCATAAGTTATGAAGAATTTATAACTACTGAAATATTCTCTCCGCTACTCATGACGC
GTAGCGGCTATGGGGAAAATACTTTTGGCAACGATAATATTGCACATGGTTATACGTCATTCGGTGCACCTGCTTCCTCT
ATAGATATGTCTGTCCCTTATGCAGCAGGCGCACTCTCATCGACTTTAAACGACCTTTTCCGTTGGGATCACTCTTTTTA
TGAAAATGCTTTATTAACTAAAGCCAGTAAGGCGCTTCTTTATAGACCAGGCTTAAATAATTATGCGATGGGTTGGGCAG
TGAGTACAGGTGATAATGGTCGGGTATATCATCACGGTGGTCTTATCCATGGCTTTTCCTCATTTATTGCCCGTTACCCT
GAGGAACAGAGACTCATCGTCGTATTAGCAAATGAAGAGGGGTATGATGTTGCTGGCTTAGCAGACCAATTGAATAAACT
GATAAATTCAAACTAA

Upstream 100 bases:

>100_bases
GCAAAGAAATAACAAGGAATTTAAACGGAACTAAAACAATTGATTCCGTTTTACATGCTGATAAATAGCACACTCTATTT
TGAACTGAAAAAGGATAATC

Downstream 100 bases:

>100_bases
TTCGCTTTTGGGTTTTAGTTTAGTGTTTAACACTAAAATTCAGTCAATTATCTAGTGTCTGTTTAATTATATTGTTTCGT
TTTCAATGAAATTCGTCAGT

Product: beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNTVKFKQNVKFFTLLLSLCLLLSGCRNNLVPFTKGQSVDQYVDSLSFSGAVLIVDQGEIVLSKGVGLVDRKGTETINAD
TVFRLGSVSKQFTATAILLLQQKGLLNIDEPVATYLPDFPHGDIISIKNLLQHTSGIPNYTEFKNFGVIATQYHSPAQLV
AMFKDLPLEFTPGTRFNYSNSGYVLLGYLIEVVSGISYEEFITTEIFSPLLMTRSGYGENTFGNDNIAHGYTSFGAPASS
IDMSVPYAAGALSSTLNDLFRWDHSFYENALLTKASKALLYRPGLNNYAMGWAVSTGDNGRVYHHGGLIHGFSSFIARYP
EEQRLIVVLANEEGYDVAGLADQLNKLINSN

Sequences:

>Translated_351_residues
MNTVKFKQNVKFFTLLLSLCLLLSGCRNNLVPFTKGQSVDQYVDSLSFSGAVLIVDQGEIVLSKGVGLVDRKGTETINAD
TVFRLGSVSKQFTATAILLLQQKGLLNIDEPVATYLPDFPHGDIISIKNLLQHTSGIPNYTEFKNFGVIATQYHSPAQLV
AMFKDLPLEFTPGTRFNYSNSGYVLLGYLIEVVSGISYEEFITTEIFSPLLMTRSGYGENTFGNDNIAHGYTSFGAPASS
IDMSVPYAAGALSSTLNDLFRWDHSFYENALLTKASKALLYRPGLNNYAMGWAVSTGDNGRVYHHGGLIHGFSSFIARYP
EEQRLIVVLANEEGYDVAGLADQLNKLINSN
>Mature_351_residues
MNTVKFKQNVKFFTLLLSLCLLLSGCRNNLVPFTKGQSVDQYVDSLSFSGAVLIVDQGEIVLSKGVGLVDRKGTETINAD
TVFRLGSVSKQFTATAILLLQQKGLLNIDEPVATYLPDFPHGDIISIKNLLQHTSGIPNYTEFKNFGVIATQYHSPAQLV
AMFKDLPLEFTPGTRFNYSNSGYVLLGYLIEVVSGISYEEFITTEIFSPLLMTRSGYGENTFGNDNIAHGYTSFGAPASS
IDMSVPYAAGALSSTLNDLFRWDHSFYENALLTKASKALLYRPGLNNYAMGWAVSTGDNGRVYHHGGLIHGFSSFIARYP
EEQRLIVVLANEEGYDVAGLADQLNKLINSN

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=194, Percent_Identity=28.8659793814433, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790593, Length=326, Percent_Identity=22.6993865030675, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786574, Length=340, Percent_Identity=21.7647058823529, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17550934, Length=186, Percent_Identity=31.1827956989247, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115533026, Length=344, Percent_Identity=24.1279069767442, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17565630, Length=276, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 38522; Mature: 38522

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVKFKQNVKFFTLLLSLCLLLSGCRNNLVPFTKGQSVDQYVDSLSFSGAVLIVDQGEI
CCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCE
VLSKGVGLVDRKGTETINADTVFRLGSVSKQFTATAILLLQQKGLLNIDEPVATYLPDFP
EEECCCCCEECCCCCEECCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
HGDIISIKNLLQHTSGIPNYTEFKNFGVIATQYHSPAQLVAMFKDLPLEFTPGTRFNYSN
CCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCC
SGYVLLGYLIEVVSGISYEEFITTEIFSPLLMTRSGYGENTFGNDNIAHGYTSFGAPASS
CCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
IDMSVPYAAGALSSTLNDLFRWDHSFYENALLTKASKALLYRPGLNNYAMGWAVSTGDNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCC
RVYHHGGLIHGFSSFIARYPEEQRLIVVLANEEGYDVAGLADQLNKLINSN
EEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTVKFKQNVKFFTLLLSLCLLLSGCRNNLVPFTKGQSVDQYVDSLSFSGAVLIVDQGEI
CCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCE
VLSKGVGLVDRKGTETINADTVFRLGSVSKQFTATAILLLQQKGLLNIDEPVATYLPDFP
EEECCCCCEECCCCCEECCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
HGDIISIKNLLQHTSGIPNYTEFKNFGVIATQYHSPAQLVAMFKDLPLEFTPGTRFNYSN
CCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCC
SGYVLLGYLIEVVSGISYEEFITTEIFSPLLMTRSGYGENTFGNDNIAHGYTSFGAPASS
CCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
IDMSVPYAAGALSSTLNDLFRWDHSFYENALLTKASKALLYRPGLNNYAMGWAVSTGDNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCC
RVYHHGGLIHGFSSFIARYPEEQRLIVVLANEEGYDVAGLADQLNKLINSN
EEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]