| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711480
Identifier: 59711480
GI number: 59711480
Start: 957779
End: 958165
Strand: Direct
Name: 59711480
Synonym: VF_0873
Alternate gene names: NA
Gene position: 957779-958165 (Clockwise)
Preceding gene: 59711475
Following gene: 59711485
Centisome position: 33.05
GC content: 36.69
Gene sequence:
>387_bases ATGAAAAAATACGTCACTTTGGCTTTATCGTTAGCAACATTAACTATGTCCACTCATGTCATGGCTTTAAATGGTATGGG GGTCCAAATTGAAGCTATTTATATGAGCTCTAATTCTAACGGTTTATTTATTACACCAAAAGAAAAGCAATCTCCAAGTG GTTTTTATCGCCCAGAGTTTCCTCAAACTTGCCAAATTAATGGTGAGTTCTACCTCCCTTTACCTGATGGAGCTATTGGT ACTCGTATGCATTTTATGCTTGAAGATGCTATGCAGAATAGTGCGTTAATCATGTTATATTCTGATGGAGAATGTGCGGG TGACCCAAAAATGGATGGTAGTTCTAGACCAAAAGTTGTTGCCATTAAAAAATTATTTAAAGGGTAG
Upstream 100 bases:
>100_bases ATTGAGTTTGTTTTTTTTCTAAAGAACAGTATACAATTCAATTAAGACGGCGTAGAGTTCTTATTTCCTATAATTCTTTA TCAATAAGTATATAAATAAT
Downstream 100 bases:
>100_bases TTATTTTAACGCTTCTAATCTGAGATGCATTACTTTTTAATGTGCTGCTAAAATCAAAACAAAATTCTTCATCATTACTT ATAGTATTTTTAGTTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKKYVTLALSLATLTMSTHVMALNGMGVQIEAIYMSSNSNGLFITPKEKQSPSGFYRPEFPQTCQINGEFYLPLPDGAIG TRMHFMLEDAMQNSALIMLYSDGECAGDPKMDGSSRPKVVAIKKLFKG
Sequences:
>Translated_128_residues MKKYVTLALSLATLTMSTHVMALNGMGVQIEAIYMSSNSNGLFITPKEKQSPSGFYRPEFPQTCQINGEFYLPLPDGAIG TRMHFMLEDAMQNSALIMLYSDGECAGDPKMDGSSRPKVVAIKKLFKG >Mature_128_residues MKKYVTLALSLATLTMSTHVMALNGMGVQIEAIYMSSNSNGLFITPKEKQSPSGFYRPEFPQTCQINGEFYLPLPDGAIG TRMHFMLEDAMQNSALIMLYSDGECAGDPKMDGSSRPKVVAIKKLFKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14049; Mature: 14049
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYVTLALSLATLTMSTHVMALNGMGVQIEAIYMSSNSNGLFITPKEKQSPSGFYRPEF CCCEEEEEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC PQTCQINGEFYLPLPDGAIGTRMHFMLEDAMQNSALIMLYSDGECAGDPKMDGSSRPKVV CCEEEECCEEEEECCCCCCCHHHHEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEE AIKKLFKG EEEHHHCC >Mature Secondary Structure MKKYVTLALSLATLTMSTHVMALNGMGVQIEAIYMSSNSNGLFITPKEKQSPSGFYRPEF CCCEEEEEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC PQTCQINGEFYLPLPDGAIGTRMHFMLEDAMQNSALIMLYSDGECAGDPKMDGSSRPKVV CCEEEECCEEEEECCCCCCCHHHHEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEE AIKKLFKG EEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA