| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711475
Identifier: 59711475
GI number: 59711475
Start: 953932
End: 954435
Strand: Direct
Name: 59711475
Synonym: VF_0868
Alternate gene names: NA
Gene position: 953932-954435 (Clockwise)
Preceding gene: 59711472
Following gene: 59711480
Centisome position: 32.92
GC content: 37.5
Gene sequence:
>504_bases ATGTCTAAAGATTTTAGTGTCACCACAGAATACGTTCTCGACAAGACCTTCTTTGCAGAATGTTATGATCAAACTAGTCA GCCGATTACCTTTCCGAAAGCTTATTTAAAAGGAATACTCTTTTTTCTTTTTGGTCTGGCGTTATTAAAACTTGAGCTAT TACCTAATGGCTACATTGGTTGGTTTTTTATTGCGTTGAGTATTATTGAAGCGTTCAGTATTTACTTTAAGAGAACGTGG TGGCTATGGCGACAATCCATCAGTTCACTCTCTGGCAGTAAAGTGGTGTTTAACGTTGACGCAAATGGTGTGAGTTATAA AAGCCTTAAAAACACTAAAAATTCTCGCACCATCGCTTGGAGTGACATCGACCAAGTTGAACAAAGCGATTTAGGGCTTA TTTTTCATATTGGAAAACAGCGCCAATACGTCAGTAAATCGTGCTTAAATGAAGAAGAAATCGCCTTTATTTTAGAGCAG CATGAACAATCAAAAGTCGAGTAG
Upstream 100 bases:
>100_bases CAAAATAGTTAAAGAAAAACATCGATAAACGATACAATAGGTGAGTTGCAAGATGGCAGCATAAAAGACTCATTCACATA AAACCGTAAAGTAGCCCTAT
Downstream 100 bases:
>100_bases TTCTCATCAAACTACATAATATTAGCAACTCAAATGGTGCGATACTGTCGCACCATTTGAATTTGTAGTCTTTCATTCAC TCTATTTAGTGATAAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSKDFSVTTEYVLDKTFFAECYDQTSQPITFPKAYLKGILFFLFGLALLKLELLPNGYIGWFFIALSIIEAFSIYFKRTW WLWRQSISSLSGSKVVFNVDANGVSYKSLKNTKNSRTIAWSDIDQVEQSDLGLIFHIGKQRQYVSKSCLNEEEIAFILEQ HEQSKVE
Sequences:
>Translated_167_residues MSKDFSVTTEYVLDKTFFAECYDQTSQPITFPKAYLKGILFFLFGLALLKLELLPNGYIGWFFIALSIIEAFSIYFKRTW WLWRQSISSLSGSKVVFNVDANGVSYKSLKNTKNSRTIAWSDIDQVEQSDLGLIFHIGKQRQYVSKSCLNEEEIAFILEQ HEQSKVE >Mature_166_residues SKDFSVTTEYVLDKTFFAECYDQTSQPITFPKAYLKGILFFLFGLALLKLELLPNGYIGWFFIALSIIEAFSIYFKRTWW LWRQSISSLSGSKVVFNVDANGVSYKSLKNTKNSRTIAWSDIDQVEQSDLGLIFHIGKQRQYVSKSCLNEEEIAFILEQH EQSKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19324; Mature: 19193
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDFSVTTEYVLDKTFFAECYDQTSQPITFPKAYLKGILFFLFGLALLKLELLPNGYIG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WFFIALSIIEAFSIYFKRTWWLWRQSISSLSGSKVVFNVDANGVSYKSLKNTKNSRTIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEE SDIDQVEQSDLGLIFHIGKQRQYVSKSCLNEEEIAFILEQHEQSKVE CCHHHHHHCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKDFSVTTEYVLDKTFFAECYDQTSQPITFPKAYLKGILFFLFGLALLKLELLPNGYIG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WFFIALSIIEAFSIYFKRTWWLWRQSISSLSGSKVVFNVDANGVSYKSLKNTKNSRTIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEE SDIDQVEQSDLGLIFHIGKQRQYVSKSCLNEEEIAFILEQHEQSKVE CCHHHHHHCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA