Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711463

Identifier: 59711463

GI number: 59711463

Start: 942629

End: 943255

Strand: Direct

Name: 59711463

Synonym: VF_0856

Alternate gene names: NA

Gene position: 942629-943255 (Clockwise)

Preceding gene: 59711462

Following gene: 59711464

Centisome position: 32.53

GC content: 39.23

Gene sequence:

>627_bases
ATGCATCATAAGGCCATAAAAGTCCGCCACCTTATAGCGCTTGTTCTATCCTTTCTTTTGATGGGATGTGCAGCAAAACC
GGTAAAGCAACCCAACCAAGTAGAAGTATCACAAGGTCAGTTTATTACCTTACCTCAGCCTGAAGAGTATGGCAGTGACT
TATCACTTAGTCAGTTAATCTCAGTTGAATGGCAAGGAAAAAAGAATCAACTTCCTGTTCAACTGCAACTGACAGGTAAT
GACTTGGTATTAGCTGGCTTTGCCTCATGGGGTTCTCGTTTATTAAGCTTAGATTATGATGGTCAAACATTAGATACTTA
CGTAATGGCAGGGCTAAGTGACACGCTACCACCGCCAGAGCAAGTGCTATTTAATGTCATGATTACCTTGTGGCCACTTG
AAGCATGGCAAGAAAGTTTAACTAGCATTGGCTGGCAACTAAACGAACATGACAATCATAGAACATTAGTGACTGAATCA
GGAAAAACAATCCTTGATGCTCGTTATGATGACATCACAGACAAATTAAGTGGTGAAATTGTGTTAACCAGTCCAGATTT
TGGTTATGTCATAAAAATTAAAACGTTCTCGCATTCAAATACAACAACTCAAAATAATAACGGATAA

Upstream 100 bases:

>100_bases
ACGGTTCTTACAGGGATTATCGTGGCTTGGTTACTGGCTCCGTTAAGCCAACAAAATAAAGAGAGTAAAGGGTATATTAA
TACGCTTTCGGAGAAAAAAG

Downstream 100 bases:

>100_bases
ATTAAATGAGTGACTTTCCTTTATATATACATGCGTGTGGCTCACATTCAGCCATGGGTAAAGAGGTTGATGAAATCCAT
CAAGTATTGAGTGGAAATAA

Product: phospho-N-acetylmuramoyl-pentapeptide- transferase

Products: UMP; Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-; $diphosphoundecaprenol

Alternate protein names: Phospho-N-Acetylmuramoyl-Pentapeptide-Transferase

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLISVEWQGKKNQLPVQLQLTGN
DLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPEQVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTES
GKTILDARYDDITDKLSGEIVLTSPDFGYVIKIKTFSHSNTTTQNNNG

Sequences:

>Translated_208_residues
MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLISVEWQGKKNQLPVQLQLTGN
DLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPEQVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTES
GKTILDARYDDITDKLSGEIVLTSPDFGYVIKIKTFSHSNTTTQNNNG
>Mature_208_residues
MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLISVEWQGKKNQLPVQLQLTGN
DLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPEQVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTES
GKTILDARYDDITDKLSGEIVLTSPDFGYVIKIKTFSHSNTTTQNNNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.8.13

Molecular weight: Translated: 23163; Mature: 23163

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCHHHCCCCCHHHEE
SVEWQGKKNQLPVQLQLTGNDLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPE
EEEECCCCCCCCEEEEECCCCEEEEEEHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCHH
QVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTESGKTILDARYDDITDKLSGEI
HHHHHHHHHHHCHHHHHHHHHHHCCEECCCCCCEEEEECCCCEEEECCHHHHHHHHCCCE
VLTSPDFGYVIKIKTFSHSNTTTQNNNG
EEECCCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCHHHCCCCCHHHEE
SVEWQGKKNQLPVQLQLTGNDLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPE
EEEECCCCCCCCEEEEECCCCEEEEEEHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCHH
QVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTESGKTILDARYDDITDKLSGEI
HHHHHHHHHHHCHHHHHHHHHHHCCEECCCCCCEEEEECCCCEEEECCHHHHHHHHCCCE
VLTSPDFGYVIKIKTFSHSNTTTQNNNG
EEECCCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala); undecaprenyl phosphate

Specific reaction: UDP-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala) + undecaprenyl phosphate = UMP + Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D- $Ala-D-Ala)-diphosphoundecaprenol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA