Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711461

Identifier: 59711461

GI number: 59711461

Start: 939602

End: 940222

Strand: Direct

Name: 59711461

Synonym: VF_0854

Alternate gene names: NA

Gene position: 939602-940222 (Clockwise)

Preceding gene: 59711460

Following gene: 59711462

Centisome position: 32.43

GC content: 37.36

Gene sequence:

>621_bases
ATGCTTAATGTTAAACGTTATTGGTCATTATTATTGGCATCGTTTGTTATGCTTTTTAGCGTAAATAGCTTTGCATTTAG
TGTTGATGACTTGCAGCAGCAACTCGCAAAATCGACGCTTGTTCGTGGTGATTTTAAACAAGTAAGAACCATGCAGATGT
TTGCACAACCATTATCGACATCAGGTACTTTTTTGTTGGATCATGAAAAGGGGTTATTGTGGCAACAAACAACGCCTTTT
CCGATTGCGTTGACTTTAACGCAGAACAAACTTCGCCAATCCATTAATGGTGACACTCAAGTCATGACGGATTCAGATAA
TCCAATGGCGTTTTATTTTACTCGTCTATTTCTATCTCTATTTAAAGGGGATACGGAATCCATTAAAGAAAATTTCACTC
TGCAATTAACGGGTGAAAAAGACGCTTGGACACTCATACTTACTCCAACTAAAGCCCCAATTGACAGCGTATTTAAAACC
ATAAAAATTGAGGGTAATGATTATTTAAATCGAGTGGTATTAAGTGAAGTGCGAGGTGACGTAACTGAAATGGTATTTAC
TAATCAGTCGACAGAACCTGCGACCTTAACAGAAGAAGAGTTACGTGTTTTCGAATTCTAA

Upstream 100 bases:

>100_bases
ACTAAAGCCCATACAATGCAAGTAGCGGTAAGCATAGAAACTGAAGAAATGTGCTTTGTTTCTCCTCGTATATTTACCGA
TAAAGTAGAGGCTTATCATA

Downstream 100 bases:

>100_bases
TTGGATAAAACCACGAGTTTTAGCTCTGGTTTGGGCATTGGCTCTATTAGGAATCGCAGGGGTATTTGGTTATCAATGTA
CAACCAAAGGCGCACTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein; Flagellum-Specific ATP Synthase; Exported Lipoprotein; Secreted Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLSTSGTFLLDHEKGLLWQQTTPF
PIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSLFKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKT
IKIEGNDYLNRVVLSEVRGDVTEMVFTNQSTEPATLTEEELRVFEF

Sequences:

>Translated_206_residues
MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLSTSGTFLLDHEKGLLWQQTTPF
PIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSLFKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKT
IKIEGNDYLNRVVLSEVRGDVTEMVFTNQSTEPATLTEEELRVFEF
>Mature_206_residues
MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLSTSGTFLLDHEKGLLWQQTTPF
PIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSLFKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKT
IKIEGNDYLNRVVLSEVRGDVTEMVFTNQSTEPATLTEEELRVFEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23549; Mature: 23549

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLST
CCCHHHHHHHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
SGTFLLDHEKGLLWQQTTPFPIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSL
CCCEEEECCCCCEEECCCCCEEEEEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH
FKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKTIKIEGNDYLNRVVLSEVRGD
HCCCHHHHHCCEEEEEECCCCCEEEEEECCCCCHHHHHHEEEECCCHHHHHHHHHHHCCH
VTEMVFTNQSTEPATLTEEELRVFEF
HHHHHEECCCCCCCCCCHHHHHEECC
>Mature Secondary Structure
MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLST
CCCHHHHHHHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
SGTFLLDHEKGLLWQQTTPFPIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSL
CCCEEEECCCCCEEECCCCCEEEEEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH
FKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKTIKIEGNDYLNRVVLSEVRGD
HCCCHHHHHCCEEEEEECCCCCEEEEEECCCCCHHHHHHEEEECCCHHHHHHHHHHHCCH
VTEMVFTNQSTEPATLTEEELRVFEF
HHHHHEECCCCCCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA