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The map label for this gene is ybgI [C]

Identifier: 59711424

GI number: 59711424

Start: 896158

End: 896913

Strand: Direct

Name: ybgI [C]

Synonym: VF_0817

Alternate gene names: 59711424

Gene position: 896158-896913 (Clockwise)

Preceding gene: 59711423

Following gene: 59711426

Centisome position: 30.93

GC content: 39.15

Gene sequence:

>756_bases
ATGAATAATTTTCAGTTAGAACAATTATTAAACTCAGAGTTAAAACCTCAATTAATTAAAGATTATTGCCCAAATGGTCT
TCAAGTTGAAGGTTCAAATGAGATAAAAAAGATCGTAACAGGGGTTACTGCATCTCAAGCTTTAATTGATGCCGCTATTG
AAGAAAATGCAGATGCATTACTTGTGCATCATGGCTATTTTTGGAAAGGGGAAGCCGAGCCAATCACTGGAATGAAAGGT
AAGCGTATTCGTTCATTAATTCAAAATGATATTAATCTATTTGCTTACCATTTGCCTTTAGATATTCATCCAACGTTGGG
TAATAACGCTGAGCTAGCTCGTTTATTTTCGGTCTCAAATGTGGAAGGGCTAGAAGCGACACCACAATCGATCGCTATGA
AAGGAGAGCTGACTGAAACGCTATCAGGCGAAGAATTTGCACAGCGTATTCAGCAAGTATTAAATCGCGAACCATTGCAT
ATTAAACCAACACAAGACAAGCCGATTAAAACGGTTGCTTGGTGTTCTGGTGGTGGCCAAGATTATATAGAATTGGCGGC
TCAACAGGGGATGGATGCGTTTATTTCGGGTGAGATTTCGGAACGTACGACTTACATTGCTCGTGAACTAGGGATTCACT
ATTTTGCTGCAGGTCATCATGCAACAGAGCGTTATGGTATTAAAGCGTTAGGTGAGTGGTTAGAAAAAGAGCATGGGTTT
GATGTTAAGTTTATTGATATCGATAACCCAGTATAG

Upstream 100 bases:

>100_bases
ATTGTAAGTAACGTGTTTAAAGAAGCCGGTTTATAATTTTTTAAGTAATACAAATTAAGCAGCGCATGTCGCTGCTTTTT
TTTGATAAGAAGGTCATGAC

Downstream 100 bases:

>100_bases
TCTATTTTGAGTTATCAATACGGTGATATAAAAAAAGGTTGATGTATTTACATCAACCTTTTTGTTCATAGGCCTAACGA
TTTAAACCGACATTATTCAC

Product: metal-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNNFQLEQLLNSELKPQLIKDYCPNGLQVEGSNEIKKIVTGVTASQALIDAAIEENADALLVHHGYFWKGEAEPITGMKG
KRIRSLIQNDINLFAYHLPLDIHPTLGNNAELARLFSVSNVEGLEATPQSIAMKGELTETLSGEEFAQRIQQVLNREPLH
IKPTQDKPIKTVAWCSGGGQDYIELAAQQGMDAFISGEISERTTYIARELGIHYFAAGHHATERYGIKALGEWLEKEHGF
DVKFIDIDNPV

Sequences:

>Translated_251_residues
MNNFQLEQLLNSELKPQLIKDYCPNGLQVEGSNEIKKIVTGVTASQALIDAAIEENADALLVHHGYFWKGEAEPITGMKG
KRIRSLIQNDINLFAYHLPLDIHPTLGNNAELARLFSVSNVEGLEATPQSIAMKGELTETLSGEEFAQRIQQVLNREPLH
IKPTQDKPIKTVAWCSGGGQDYIELAAQQGMDAFISGEISERTTYIARELGIHYFAAGHHATERYGIKALGEWLEKEHGF
DVKFIDIDNPV
>Mature_251_residues
MNNFQLEQLLNSELKPQLIKDYCPNGLQVEGSNEIKKIVTGVTASQALIDAAIEENADALLVHHGYFWKGEAEPITGMKG
KRIRSLIQNDINLFAYHLPLDIHPTLGNNAELARLFSVSNVEGLEATPQSIAMKGELTETLSGEEFAQRIQQVLNREPLH
IKPTQDKPIKTVAWCSGGGQDYIELAAQQGMDAFISGEISERTTYIARELGIHYFAAGHHATERYGIKALGEWLEKEHGF
DVKFIDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=54.4, Blast_Score=279, Evalue=1e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27909; Mature: 27909

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFQLEQLLNSELKPQLIKDYCPNGLQVEGSNEIKKIVTGVTASQALIDAAIEENADAL
CCCCHHHHHHCCCCCHHHHHHHCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHCCCCEE
LVHHGYFWKGEAEPITGMKGKRIRSLIQNDINLFAYHLPLDIHPTLGNNAELARLFSVSN
EEECCEEECCCCCCCCCCCHHHHHHHHHCCHHEEEEECCEEECCCCCCCHHHHHHHHHCC
VEGLEATPQSIAMKGELTETLSGEEFAQRIQQVLNREPLHIKPTQDKPIKTVAWCSGGGQ
CCCCCCCHHHHEECCCHHHHCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCH
DYIELAAQQGMDAFISGEISERTTYIARELGIHYFAAGHHATERYGIKALGEWLEKEHGF
HHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCC
DVKFIDIDNPV
CEEEEECCCCC
>Mature Secondary Structure
MNNFQLEQLLNSELKPQLIKDYCPNGLQVEGSNEIKKIVTGVTASQALIDAAIEENADAL
CCCCHHHHHHCCCCCHHHHHHHCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHCCCCEE
LVHHGYFWKGEAEPITGMKGKRIRSLIQNDINLFAYHLPLDIHPTLGNNAELARLFSVSN
EEECCEEECCCCCCCCCCCHHHHHHHHHCCHHEEEEECCEEECCCCCCCHHHHHHHHHCC
VEGLEATPQSIAMKGELTETLSGEEFAQRIQQVLNREPLHIKPTQDKPIKTVAWCSGGGQ
CCCCCCCHHHHEECCCHHHHCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCH
DYIELAAQQGMDAFISGEISERTTYIARELGIHYFAAGHHATERYGIKALGEWLEKEHGF
HHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCC
DVKFIDIDNPV
CEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]