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The map label for this gene is oadB [H]

Identifier: 59711147

GI number: 59711147

Start: 587010

End: 588140

Strand: Direct

Name: oadB [H]

Synonym: VF_0540

Alternate gene names: 59711147

Gene position: 587010-588140 (Clockwise)

Preceding gene: 59711146

Following gene: 59711148

Centisome position: 20.26

GC content: 40.41

Gene sequence:

>1131_bases
ATGGATGGTTTATTAACATTATGGAATGAAACAGCCATTGCCAATTTTAAGTTTGAGCAACTTATTATGATGGCTGTGGG
TTGTGGTTTGCTCTTCTTAGCAATAAAAAAAGGGTTTGAGCCGCTATTATTATTACCTATTGGATTTGGTGCAATTTTAG
CAAACATTCCTAATGCAGGTTTTACAGATCCTGGCGGACTGCTTTACTACGTTTATTACGTAGGGATTGAAACAGGAATA
TTCCCGTTACTTATCTTTATGGGCGTAGGAGCGATGACGGACTTTGGTGCCTTAATTGCTAACCCTAAAACATTATGGTT
AGGCGCAGCTGCTCAAGTCGGTATTTTTGCCACGTTGTTTGGTGCAATTTTACTTAACTATGTACCAGGAATGGAGTTTA
CACTAGCTGACGCTTCTTCCATTGCGATTATTGGTGGAGCTGATGGTCCAACGGCAATCTTTTTGTCTAGCCAGTTATCA
CCAGATCTATTAGGTGCAATAGCGGTTGCTGCCTATAGCTATATGGCATTAGTGCCTATTATCCAGCCACCAATTATGAA
AGCACTGACGACACCTGAAGAGCGCCAAATTAAAATGGCTCAATTGCGTCATGTTGGTAAAGCTGAGAAGATACTATTTC
CATTAGCGGTATTACTAATGACTATTTTATTCTTACCATCTGCGACGCCACTTGTTGGTATGTTTTGCTTAGGTAATTTA
ATGAAAGAGTCTGGTGTGGTTGATCGTTTATCAAGTACTGCTCAAAATGAATTAATTAATATTGTTACGATCTTCTTAGG
GCTAGGTGTTGGATCTAAGCTAAAAGCGGATACCTTCTTAAATGTAGAGACATTAGGTATTTTGGCTCTTGGTGCTGTTG
CTTTTAGTATTGGTACAGCAGGTGGTGTCATTATGGCTAAGGTTCTTAATAAGTTCTCGAAAGAAGATATTAACCCATTA
ATCGGTGCAGCAGGTGTATCTGCCGTTCCAATGGCGGCTCGTGTGGTTAATAAAGTTGGTCTTGAGGCTAATCCTCAAAA
CTTCTTGTTAATGCATGCTATGGGGCCAAATGTAGCGGGTGTGCTTGGTTCTGCTGTTGCTGCAGGTATACTTCTTGCGC
TAGTTGGTTAA

Upstream 100 bases:

>100_bases
TTCACGTAGTGGTACAGTGCAAGATATTTTAACTAAAGAAGGTGATGCGGTTACTGTTGGTACACCGTTACTTTCTCTAG
CGTAGATGTAGGTATAAAAC

Downstream 100 bases:

>100_bases
TTTTGAACAAAACCTAACAATAAAAGGGTGCTGATGCGCCCTTTTTTATTTTATGCTTACTGTTATCTTAGTATTTATAA
TGGAATAAATTCAATCATGT

Product: oxaloacetate decarboxylase beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDGLLTLWNETAIANFKFEQLIMMAVGCGLLFLAIKKGFEPLLLLPIGFGAILANIPNAGFTDPGGLLYYVYYVGIETGI
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLFGAILLNYVPGMEFTLADASSIAIIGGADGPTAIFLSSQLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVGKAEKILFPLAVLLMTILFLPSATPLVGMFCLGNL
MKESGVVDRLSSTAQNELINIVTIFLGLGVGSKLKADTFLNVETLGILALGAVAFSIGTAGGVIMAKVLNKFSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG

Sequences:

>Translated_376_residues
MDGLLTLWNETAIANFKFEQLIMMAVGCGLLFLAIKKGFEPLLLLPIGFGAILANIPNAGFTDPGGLLYYVYYVGIETGI
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLFGAILLNYVPGMEFTLADASSIAIIGGADGPTAIFLSSQLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVGKAEKILFPLAVLLMTILFLPSATPLVGMFCLGNL
MKESGVVDRLSSTAQNELINIVTIFLGLGVGSKLKADTFLNVETLGILALGAVAFSIGTAGGVIMAKVLNKFSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG
>Mature_376_residues
MDGLLTLWNETAIANFKFEQLIMMAVGCGLLFLAIKKGFEPLLLLPIGFGAILANIPNAGFTDPGGLLYYVYYVGIETGI
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLFGAILLNYVPGMEFTLADASSIAIIGGADGPTAIFLSSQLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVGKAEKILFPLAVLLMTILFLPSATPLVGMFCLGNL
MKESGVVDRLSSTAQNELINIVTIFLGLGVGSKLKADTFLNVETLGILALGAVAFSIGTAGGVIMAKVLNKFSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 39110; Mature: 39110

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLLTLWNETAIANFKFEQLIMMAVGCGLLFLAIKKGFEPLLLLPIGFGAILANIPNAG
CCCCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCC
FTDPGGLLYYVYYVGIETGIFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLF
CCCCCCCEEEHEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
GAILLNYVPGMEFTLADASSIAIIGGADGPTAIFLSSQLSPDLLGAIAVAAYSYMALVPI
HHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
IQPPIMKALTTPEERQIKMAQLRHVGKAEKILFPLAVLLMTILFLPSATPLVGMFCLGNL
CCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MKESGVVDRLSSTAQNELINIVTIFLGLGVGSKLKADTFLNVETLGILALGAVAFSIGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCC
GGVIMAKVLNKFSKEDINPLIGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAG
CHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLALVG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGLLTLWNETAIANFKFEQLIMMAVGCGLLFLAIKKGFEPLLLLPIGFGAILANIPNAG
CCCCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCC
FTDPGGLLYYVYYVGIETGIFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLF
CCCCCCCEEEHEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
GAILLNYVPGMEFTLADASSIAIIGGADGPTAIFLSSQLSPDLLGAIAVAAYSYMALVPI
HHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
IQPPIMKALTTPEERQIKMAQLRHVGKAEKILFPLAVLLMTILFLPSATPLVGMFCLGNL
CCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MKESGVVDRLSSTAQNELINIVTIFLGLGVGSKLKADTFLNVETLGILALGAVAFSIGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCC
GGVIMAKVLNKFSKEDINPLIGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAG
CHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLALVG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]