| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is secG [H]
Identifier: 59711090
GI number: 59711090
Start: 518503
End: 518835
Strand: Direct
Name: secG [H]
Synonym: VF_0483
Alternate gene names: 59711090
Gene position: 518503-518835 (Clockwise)
Preceding gene: 172087666
Following gene: 59711091
Centisome position: 17.89
GC content: 42.64
Gene sequence:
>333_bases ATGCATACGATTCTACTTGTGATTTATCTGATTGCCGCAGTCGGTGTAATTGGCCTAGTATTGGTACAACACGGTAAAGG CGCAGATATGGGAGCTTCATTTGGGGCTGGAGCATCAAATACTGTATTTGGCTCTAGTGGCTCTGGAAACTTTTTAACCC GAATGACTGCAATTTGTGCAACAGTATTTTTTGTTATCAGTTTGGCGCTAGGCAATATGTCTACGCATAAATCTGAAGGT TTTGATCTTAAATTAGATCAACAAGCGACAGAGCAAGTAACTGACAACGCGAGCGACGTTCCTGCTACTGAAGACAGCGA CGTTCCTCTTTAA
Upstream 100 bases:
>100_bases AGTAGCCTAGTTTGGTTAATATCCTTCGGCCTCTTAATTGAGAGGGCGCTGGTGTTGCCAATAGGCTACCGGTACATTAA TTAGATACATGGGTGACGGA
Downstream 100 bases:
>100_bases AAGAATTTAGCCGAGATGGTGAAATTGGTAGACACGCTAGCATGAGGTGCTAGTGCCTTATGGTGTGAGGGTTCAAGTCC CTCTCTCGGCACCATATTCA
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: P12; Preprotein translocase band 1 subunit [H]
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSSGSGNFLTRMTAICATVFFVISLALGNMSTHKSEG FDLKLDQQATEQVTDNASDVPATEDSDVPL
Sequences:
>Translated_110_residues MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSSGSGNFLTRMTAICATVFFVISLALGNMSTHKSEG FDLKLDQQATEQVTDNASDVPATEDSDVPL >Mature_110_residues MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSSGSGNFLTRMTAICATVFFVISLALGNMSTHKSEG FDLKLDQQATEQVTDNASDVPATEDSDVPL
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=109, Percent_Identity=53.2110091743119, Blast_Score=123, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 11333; Mature: 11333
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSSGSGNFLTRMTAICA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH TVFFVISLALGNMSTHKSEGFDLKLDQQATEQVTDNASDVPATEDSDVPL HHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSSGSGNFLTRMTAICA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH TVFFVISLALGNMSTHKSEGFDLKLDQQATEQVTDNASDVPATEDSDVPL HHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]