| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is glmM [H]
Identifier: 172087666
GI number: 172087666
Start: 517014
End: 518351
Strand: Direct
Name: glmM [H]
Synonym: VF_0481
Alternate gene names: 172087666
Gene position: 517014-518351 (Clockwise)
Preceding gene: 59711087
Following gene: 59711090
Centisome position: 17.84
GC content: 41.55
Gene sequence:
>1338_bases ATGGCTGAACGTAAATATTTCGGAACTGATGGCGTTCGAGGATTAGTAGGGCAAGCACCTATCACACCTGATTTTGTTAT GAAGCTTGGCTGGGCGGCAGGACAAGTTTTAGCTAAGCAAGGTACAAAAAAAGTCATTATTGGTAAAGATACGCGTATTT CTGGTTATATGCTTGAATCAGCATTAGAAGCAGGTTTAGCAGCTGCTGGATTACAAGCTAAATTTACGGGTCCGATGCCA ACTCCTGCTGTGGCTTACCTTACTCAGACATTTCGTGCAGAAGCAGGTATTGTGATTTCAGCTTCTCATAATCCATACTA CGATAATGGCATTAAATTCTTCTCATCAGAAGGGACAAAACTTCCGGATGACGTTGAAATGGCGATTGAAGCAGAGCTTG ATAAGCCAATGACATGTGTTGAATCTGCTTTACTTGGTAAAGCCTCTCGTCTTAATGATGCTGCAGGTCGTTACATTGAA TTCTGTAAAAGTACCTTCCCTAAAGAATTAAGTCTTGCTGGTTTAAAAATCGTTATCGATTGTGCAAATGGTGCAACGTA TCATATTGCTCCTAATGTATTTAAAGAGCTAGGTGCAGAGATCATCACAATCGGTTGTGAGCCAAACGGAACCAATATTA ACCATGAAGTAGGAGCTACTGATGTTCGAGCTCTTCAAGCAAAAGTTGTTGAAGAAAAAGCCGATTTTGGTGTTGCATTT GATGGTGACGGTGACCGTATCATCATGGTGGATGAATTCGGCGAAAAAGTAGATGGCGACCAGATTGCGTACATCATTGC TCGTGACGCACTGCGTCGTGGTGAGTTAAAAGGTGGTGTGGTTGGTACATTGATGACGAATATGGGGATGGAGGTTGCTT TACGTAATCTTGGAATTCCATTTGTTCGTTCAGATGTTGGTGACCGCTATGTGATGGAAAAACTTCTAGAAAACAACTGG TTAATTGGTGCGGAGAATTCAGGTCACGTTATTCTTTTAGATAAAGTAACGACGGGCGATGCTATTGTTGCAGCGCTTCA AGTTATTGCGTCGATTGTAGGCAGTAAAATGTCATTAAAAGAATTATGTGATGGCATGACAATGTTCCCACAAATCTTAG TTAACGTTCGATTTGCTGGTGAGAATGATCCTCTTGAATCAGATGCAGTAAAAGCAGCTCAAGCTGATGTGGAAGCTAAA TTAGGTGATAATGGTCGTGTATTATTGCGTAAGTCAGGTACAGAGCCTTTAATTCGCGTTATGGTTGAAGGTGAAGATGC GGAATTAGTGACACAATATGCGCAACAAATTGCGGATGCGGTGAAAGAAAGCTGCTAA
Upstream 100 bases:
>100_bases GATGGATATCGTAAAGGTTTGCCAAGCAACTTTAGAGCAATCTCCTCATTAAAGAGTTGTTCAATTTAAATAAATTATTA AAAAAAACATGGAGTACAAC
Downstream 100 bases:
>100_bases TTTGAGCAATTAAATGAAATTGAACGTTTTTTGTTAATTTTAACTTGTCATAGTAGCCTAGTTTGGTTAATATCCTTCGG CCTCTTAATTGAGAGGGCGC
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAERKYFGTDGVRGLVGQAPITPDFVMKLGWAAGQVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLQAKFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIE FCKSTFPKELSLAGLKIVIDCANGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVVEEKADFGVAF DGDGDRIIMVDEFGEKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIPFVRSDVGDRYVMEKLLENNW LIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLKELCDGMTMFPQILVNVRFAGENDPLESDAVKAAQADVEAK LGDNGRVLLRKSGTEPLIRVMVEGEDAELVTQYAQQIADAVKESC
Sequences:
>Translated_445_residues MAERKYFGTDGVRGLVGQAPITPDFVMKLGWAAGQVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLQAKFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIE FCKSTFPKELSLAGLKIVIDCANGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVVEEKADFGVAF DGDGDRIIMVDEFGEKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIPFVRSDVGDRYVMEKLLENNW LIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLKELCDGMTMFPQILVNVRFAGENDPLESDAVKAAQADVEAK LGDNGRVLLRKSGTEPLIRVMVEGEDAELVTQYAQQIADAVKESC >Mature_444_residues AERKYFGTDGVRGLVGQAPITPDFVMKLGWAAGQVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLQAKFTGPMPT PAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEF CKSTFPKELSLAGLKIVIDCANGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVVEEKADFGVAFD GDGDRIIMVDEFGEKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIPFVRSDVGDRYVMEKLLENNWL IGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLKELCDGMTMFPQILVNVRFAGENDPLESDAVKAAQADVEAKL GDNGRVLLRKSGTEPLIRVMVEGEDAELVTQYAQQIADAVKESC
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=443, Percent_Identity=76.2979683972912, Blast_Score=682, Evalue=0.0, Organism=Escherichia coli, GI1788361, Length=450, Percent_Identity=26.4444444444444, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 47630; Mature: 47499
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERKYFGTDGVRGLVGQAPITPDFVMKLGWAAGQVLAKQGTKKVIIGKDTRISGYMLES CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH ALEAGLAAAGLQAKFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTK HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCC LPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEFCKSTFPKELSLAGLKIVID CCCHHHHHEECCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE CANGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVVEEKADFGVAF CCCCCEEEECHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE DGDGDRIIMVDEFGEKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIP CCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCC FVRSDVGDRYVMEKLLENNWLIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLK HHHHCCCHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHH ELCDGMTMFPQILVNVRFAGENDPLESDAVKAAQADVEAKLGDNGRVLLRKSGTEPLIRV HHHCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCEEEEEECCCCCEEEE MVEGEDAELVTQYAQQIADAVKESC EECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AERKYFGTDGVRGLVGQAPITPDFVMKLGWAAGQVLAKQGTKKVIIGKDTRISGYMLES CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH ALEAGLAAAGLQAKFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTK HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCC LPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEFCKSTFPKELSLAGLKIVID CCCHHHHHEECCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE CANGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVVEEKADFGVAF CCCCCEEEECHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE DGDGDRIIMVDEFGEKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIP CCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCC FVRSDVGDRYVMEKLLENNWLIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLK HHHHCCCHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHH ELCDGMTMFPQILVNVRFAGENDPLESDAVKAAQADVEAKLGDNGRVLLRKSGTEPLIRV HHHCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCEEEEEECCCCCEEEE MVEGEDAELVTQYAQQIADAVKESC EECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA