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The map label for this gene is rimP [H]

Identifier: 59711091

GI number: 59711091

Start: 519240

End: 519695

Strand: Direct

Name: rimP [H]

Synonym: VF_0484

Alternate gene names: 59711091

Gene position: 519240-519695 (Clockwise)

Preceding gene: 59711090

Following gene: 59711092

Centisome position: 17.92

GC content: 40.57

Gene sequence:

>456_bases
ATGACAGGATTAGAAAGACAACTAACAGAAATGCTTGAGGCTCCTGTTGGTGCTTTAGGTTATGAATTGGTTGGTTTAGA
ATTCGTACGTGCGGGTGAACACTCAACACTACGTGTATTCATCGACCATGAAAATGGCATCTTTGTGGAAGACTGTGCAG
AAGCCAGTCGTCAAATCAGTGCAGTAATGGATGTAGAAGATCCAATTACGGTTGCATATAACCTAGAGGTTTCGTCTCCA
GGTCTTGAACGTCCACTGTTTAAAGCAGCACATTATCAACAATTTGTTGGTCACGAGGTCAGCCTTGTATTAAAGATGCC
GATGAATAACCGTCGTAAATGGAAAGGTGACATCCTTGAAATTAACGGTGAGATTGTTACGGTTACAGTTGATGGTAACA
ATGAAGAATTTGCGTTAAGCAACATTTCAAAGGCGAACTTGGTTCCTAAATTTTAA

Upstream 100 bases:

>100_bases
CAGTATTAAACCCCGCAATTACGGGGTTTTTTGCTATCTGAAACAGACTGTTTTTTAAGAATTGGGCCTTGAGCCCTTTT
TTTGTTTTCAGGGGATATCA

Downstream 100 bases:

>100_bases
GGCTTGAAGAGGCTAAAATGAACAAAGAAATCTTAGCTGTTGTAGAAGCAGTATCAAATGAAAAAGCTGTTCCTCGTGAG
CGAATTTTTGAAGCATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENGIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSP
GLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILEINGEIVTVTVDGNNEEFALSNISKANLVPKF

Sequences:

>Translated_151_residues
MTGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENGIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSP
GLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILEINGEIVTVTVDGNNEEFALSNISKANLVPKF
>Mature_150_residues
TGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENGIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSPG
LERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILEINGEIVTVTVDGNNEEFALSNISKANLVPKF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=67.5496688741722, Blast_Score=216, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 16803; Mature: 16672

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENGIFVEDCAEASRQIS
CCCHHHHHHHHHHCCCCCCCHHHHCEEEEECCCCCEEEEEEECCCCEEHHHHHHHHHHEE
AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILE
EEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEE
INGEIVTVTVDGNNEEFALSNISKANLVPKF
ECCEEEEEEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENGIFVEDCAEASRQIS
CCHHHHHHHHHHCCCCCCCHHHHCEEEEECCCCCEEEEEEECCCCEEHHHHHHHHHHEE
AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILE
EEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEE
INGEIVTVTVDGNNEEFALSNISKANLVPKF
ECCEEEEEEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA