| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711033
Identifier: 59711033
GI number: 59711033
Start: 455903
End: 456334
Strand: Reverse
Name: 59711033
Synonym: VF_0426
Alternate gene names: NA
Gene position: 456334-455903 (Counterclockwise)
Preceding gene: 59711034
Following gene: 59711032
Centisome position: 15.75
GC content: 35.65
Gene sequence:
>432_bases ATGAAAAAAACGCTATTACTGTTGTCACTGTTTATTTTTAGTTTACCCAGTTTTGCAGGACAATTTGTACAAATAAAAAA TGTCGAAGTACACTACTCGGCATTCAACTCCACATTCTTAACATCAAAAGTAGCTCGGGCTTATCAACTGAAACGCTCTG GTTACAATGCGTTATTAAATATCAGCGTCTTAGATACATCTCAAGCAGGAAAGCCAGCAATTTCAGCAAACATATCAGGT AGTGCAAAGAATCTATTAGGTCAAACCAAACAACTGACCTTTAAAGAAATCAAAGAACAAAATGCCATTTACTATATTGC TGAATTGCCTATAACTAATGAAGAAACCTTTCGCTTTGATATTGATGTCTCTGCTGGCACTAAAGGCGCAGGCAAGTTAA AGTTCAACCAAAAGTTTTACGTAGAAGAGTAA
Upstream 100 bases:
>100_bases ACCGAATGAAATCCAACAGCTGTTAGTATAAAAATAACGATTAATGCCGAGTTAACCCTCGGCTTTTTTATATGGAAGCC ATTTTTATAAGGAAAGTAAT
Downstream 100 bases:
>100_bases GAGAACCATTATGAGTAAAATCGTATTAGCAACGGGCAACCAAGGTAAAGTTCGTGAAATGGCCGACATCCTAGCGGATT TTGGTTTTGATGTAGTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKKTLLLLSLFIFSLPSFAGQFVQIKNVEVHYSAFNSTFLTSKVARAYQLKRSGYNALLNISVLDTSQAGKPAISANISG SAKNLLGQTKQLTFKEIKEQNAIYYIAELPITNEETFRFDIDVSAGTKGAGKLKFNQKFYVEE
Sequences:
>Translated_143_residues MKKTLLLLSLFIFSLPSFAGQFVQIKNVEVHYSAFNSTFLTSKVARAYQLKRSGYNALLNISVLDTSQAGKPAISANISG SAKNLLGQTKQLTFKEIKEQNAIYYIAELPITNEETFRFDIDVSAGTKGAGKLKFNQKFYVEE >Mature_143_residues MKKTLLLLSLFIFSLPSFAGQFVQIKNVEVHYSAFNSTFLTSKVARAYQLKRSGYNALLNISVLDTSQAGKPAISANISG SAKNLLGQTKQLTFKEIKEQNAIYYIAELPITNEETFRFDIDVSAGTKGAGKLKFNQKFYVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15927; Mature: 15927
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLLLLSLFIFSLPSFAGQFVQIKNVEVHYSAFNSTFLTSKVARAYQLKRSGYNALLN CCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE ISVLDTSQAGKPAISANISGSAKNLLGQTKQLTFKEIKEQNAIYYIAELPITNEETFRFD EEEEECCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE IDVSAGTKGAGKLKFNQKFYVEE EEECCCCCCCCEEEECCEEEECC >Mature Secondary Structure MKKTLLLLSLFIFSLPSFAGQFVQIKNVEVHYSAFNSTFLTSKVARAYQLKRSGYNALLN CCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE ISVLDTSQAGKPAISANISGSAKNLLGQTKQLTFKEIKEQNAIYYIAELPITNEETFRFD EEEEECCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE IDVSAGTKGAGKLKFNQKFYVEE EEECCCCCCCCEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA