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The map label for this gene is yjjB [C]

Identifier: 59710890

GI number: 59710890

Start: 288268

End: 288759

Strand: Direct

Name: yjjB [C]

Synonym: VF_0283

Alternate gene names: 59710890

Gene position: 288268-288759 (Clockwise)

Preceding gene: 172087652

Following gene: 59710891

Centisome position: 9.95

GC content: 40.24

Gene sequence:

>492_bases
ATGGATAGTTTGTCTTTAAGTAGTGGATTGGCGTTATTTATCGCATTATTAAATGATATGTTTTTTGCCATGATCCCTGC
GGTTGGTTTTGCCTTGGTATTTAACGTGCCTGTTAAAGCATTAAAATATTGTGCGATCGGTGGTGCGATTGGGCATGGTA
GTCGTTTTTTATTATTACACTTTGGTGTGCCGTTGGAGTGGGCAACACTATGTGCAGCCACAACCGTCGGTATGATTGGT
GTTCATTGGTCACACCGATTTTTAGCGCACCCAAAAGTATTTACAGTTGCAGCATTAATTCCAATGGTACCCGGTGTTTT
TGCTTTTAAAGCCATGATTGCTGTTGTTGAAATTAATCACCTTGGGTATTCCCCTGAATTATGGGCAATGATGATTGATA
ATTTAATTAAGACCTTATTTACGGTTGCCGCATTGGCAATTGGCCTTGCTATGCCCGGGTTACTGTTTTACCGTAGAAAG
TCGATTGTTTAA

Upstream 100 bases:

>100_bases
ATGGGAACGGCTCGTTGGACGTTCGCAACTTTACTTACCTTAGCGACCAGTATTGGTATTGTTGGTGCAATGAATTTAGT
TGGAGCGTGGGGGTGGTTAA

Downstream 100 bases:

>100_bases
GTATAGTGATTAAGGAATAACTGTGAAAATTAGCATGATAGCCGCAATGGCAAAGAATCGTATTATTGGTATTGATAATC
AGATGCCATGGCATTTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDSLSLSSGLALFIALLNDMFFAMIPAVGFALVFNVPVKALKYCAIGGAIGHGSRFLLLHFGVPLEWATLCAATTVGMIG
VHWSHRFLAHPKVFTVAALIPMVPGVFAFKAMIAVVEINHLGYSPELWAMMIDNLIKTLFTVAALAIGLAMPGLLFYRRK
SIV

Sequences:

>Translated_163_residues
MDSLSLSSGLALFIALLNDMFFAMIPAVGFALVFNVPVKALKYCAIGGAIGHGSRFLLLHFGVPLEWATLCAATTVGMIG
VHWSHRFLAHPKVFTVAALIPMVPGVFAFKAMIAVVEINHLGYSPELWAMMIDNLIKTLFTVAALAIGLAMPGLLFYRRK
SIV
>Mature_163_residues
MDSLSLSSGLALFIALLNDMFFAMIPAVGFALVFNVPVKALKYCAIGGAIGHGSRFLLLHFGVPLEWATLCAATTVGMIG
VHWSHRFLAHPKVFTVAALIPMVPGVFAFKAMIAVVEINHLGYSPELWAMMIDNLIKTLFTVAALAIGLAMPGLLFYRRK
SIV

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjP [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=151, Percent_Identity=52.9801324503311, Blast_Score=169, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 17606; Mature: 17606

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLSLSSGLALFIALLNDMFFAMIPAVGFALVFNVPVKALKYCAIGGAIGHGSRFLLLH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FGVPLEWATLCAATTVGMIGVHWSHRFLAHPKVFTVAALIPMVPGVFAFKAMIAVVEINH
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
LGYSPELWAMMIDNLIKTLFTVAALAIGLAMPGLLFYRRKSIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSLSLSSGLALFIALLNDMFFAMIPAVGFALVFNVPVKALKYCAIGGAIGHGSRFLLLH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FGVPLEWATLCAATTVGMIGVHWSHRFLAHPKVFTVAALIPMVPGVFAFKAMIAVVEINH
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
LGYSPELWAMMIDNLIKTLFTVAALAIGLAMPGLLFYRRKSIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]