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The map label for this gene is yjjP [H]

Identifier: 172087652

GI number: 172087652

Start: 287505

End: 288275

Strand: Direct

Name: yjjP [H]

Synonym: VF_0281

Alternate gene names: 172087652

Gene position: 287505-288275 (Clockwise)

Preceding gene: 59710887

Following gene: 59710890

Centisome position: 9.92

GC content: 41.5

Gene sequence:

>771_bases
ATGGATGAGAAGCAAAGAGAAATATCCCGCTTAGTAGCAAAAGCAGGACAAATGTTATTACAACATGGGGCTGAAAGTAG
TCTGGTGTCTGATGTCAGTCGACGCTTAGGGATTGCAGTTGGGGCTGATGATGTTGAAGTATCTTTATCAGCGAGTTCGT
TGGTTATTACAACGGTGATTAATGAGCACTGCATGACAACGACTCGTAGAGCACCTGATCGTGGAATCAACATGCGAGCC
GTTACAGAGATCCAAAGGATCTGCATCATGTCAGAAAAAGGATTGCTTGATAGACATGATGCCACAGAAAAATTAGAAAA
AGTGAGCCCTGAAAGATACAACCGTTGGTTAGTTGTGGTCATGATTGGTTTATCTTGTGCTAGTTTTAGCCGTTTAGCTG
GCGGGGATTGGGCGGTCTTTCTTGTTACTTTTATTGCTTCAGCTTTAGGTATGATTGTTCGTCAAGAAATTGGACACAGA
AACTTTAATCCGTTATTAAATTTTGGTGTTACAGCCTTCGTTACCACTCTTATTTCTTCTCAAGCCGTTATTTATCATAT
TGGTAATACTCCCTTTTTAGCAATGGCTTCTTCTGTTTTGATGTTGGTTCCCGGGTTCCCATTAATTAATGCTGTTGCTG
ATATGGTTAAAGGCTATGTCAATATGGGAACGGCTCGTTGGACGTTCGCAACTTTACTTACCTTAGCGACCAGTATTGGT
ATTGTTGGTGCAATGAATTTAGTTGGAGCGTGGGGGTGGTTAAATGGATAG

Upstream 100 bases:

>100_bases
AAAAAACCGCACTTGTTGCGGTTTTTTTTATTTAAATCATTAAACACTGAGTTGAAAAGATTAGAATAGATTTCTATTTA
ACGAATCATTGCGAATAAAC

Downstream 100 bases:

>100_bases
TTTGTCTTTAAGTAGTGGATTGGCGTTATTTATCGCATTATTAAATGATATGTTTTTTGCCATGATCCCTGCGGTTGGTT
TTGCCTTGGTATTTAACGTG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDEKQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADDVEVSLSASSLVITTVINEHCMTTTRRAPDRGINMRA
VTEIQRICIMSEKGLLDRHDATEKLEKVSPERYNRWLVVVMIGLSCASFSRLAGGDWAVFLVTFIASALGMIVRQEIGHR
NFNPLLNFGVTAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGTARWTFATLLTLATSIG
IVGAMNLVGAWGWLNG

Sequences:

>Translated_256_residues
MDEKQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADDVEVSLSASSLVITTVINEHCMTTTRRAPDRGINMRA
VTEIQRICIMSEKGLLDRHDATEKLEKVSPERYNRWLVVVMIGLSCASFSRLAGGDWAVFLVTFIASALGMIVRQEIGHR
NFNPLLNFGVTAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGTARWTFATLLTLATSIG
IVGAMNLVGAWGWLNG
>Mature_256_residues
MDEKQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADDVEVSLSASSLVITTVINEHCMTTTRRAPDRGINMRA
VTEIQRICIMSEKGLLDRHDATEKLEKVSPERYNRWLVVVMIGLSCASFSRLAGGDWAVFLVTFIASALGMIVRQEIGHR
NFNPLLNFGVTAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGTARWTFATLLTLATSIG
IVGAMNLVGAWGWLNG

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=253, Percent_Identity=50.197628458498, Blast_Score=263, Evalue=7e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27769; Mature: 27769

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADDVEVSLSASSLVITTVI
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECCCCEEEEECCCHHHHHHHH
NEHCMTTTRRAPDRGINMRAVTEIQRICIMSEKGLLDRHDATEKLEKVSPERYNRWLVVV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHEEH
MIGLSCASFSRLAGGDWAVFLVTFIASALGMIVRQEIGHRNFNPLLNFGVTAFVTTLISS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
QAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGTARWTFATLLTLATSIG
CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IVGAMNLVGAWGWLNG
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDEKQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADDVEVSLSASSLVITTVI
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECCCCEEEEECCCHHHHHHHH
NEHCMTTTRRAPDRGINMRAVTEIQRICIMSEKGLLDRHDATEKLEKVSPERYNRWLVVV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHEEH
MIGLSCASFSRLAGGDWAVFLVTFIASALGMIVRQEIGHRNFNPLLNFGVTAFVTTLISS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
QAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGTARWTFATLLTLATSIG
CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IVGAMNLVGAWGWLNG
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]