| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is folA [H]
Identifier: 59710891
GI number: 59710891
Start: 288794
End: 289261
Strand: Direct
Name: folA [H]
Synonym: VF_0284
Alternate gene names: 59710891
Gene position: 288794-289261 (Clockwise)
Preceding gene: 59710890
Following gene: 59710897
Centisome position: 9.97
GC content: 39.53
Gene sequence:
>468_bases ATGATAGCCGCAATGGCAAAGAATCGTATTATTGGTATTGATAATCAGATGCCATGGCATTTACCCGCTGATTTCGCTTG GTTTAAAAAATGCACTATGGGTAAACCTATTGTCATGGGGCGTAAGACTTATGAATCTATTGGTCGTCCATTACCGGGCC GATTGAATATCGTATTAAGCCGTGATGCTAATTTACAAATAGACGGAGTGACTTGTGTTACTTCGATTGAAGAAGCGAAA CAAGCTGCAGGTGATATTGAAGAACTTATGATTATTGGTGGTGGCTCAATTTACCAAGCGTGTCTTTCTGATGCAGATAA GTTATACCTGACTTTTATTGATGCTGACATCAATGGCGATACTCAATTCCCTGATTGGGGTGAGGGTTGGAATCAGACTC ATTCTGAAACGTATTCGAAAGATGAAAAGAATCAGTATGATATGGAGTTTGTGGTTCTTGAGAGATAA
Upstream 100 bases:
>100_bases GCCGCATTGGCAATTGGCCTTGCTATGCCCGGGTTACTGTTTTACCGTAGAAAGTCGATTGTTTAAGTATAGTGATTAAG GAATAACTGTGAAAATTAGC
Downstream 100 bases:
>100_bases GAGCAGGACGAACTTCGTTCTAAAGGGCGCTTCGCTTAAGGAGGCTGCGCCCTGAGGAATAAAAGCAAAGAGAAAAACGG AATACAGATTACTATCCTTG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIAAMAKNRIIGIDNQMPWHLPADFAWFKKCTMGKPIVMGRKTYESIGRPLPGRLNIVLSRDANLQIDGVTCVTSIEEAK QAAGDIEELMIIGGGSIYQACLSDADKLYLTFIDADINGDTQFPDWGEGWNQTHSETYSKDEKNQYDMEFVVLER
Sequences:
>Translated_155_residues MIAAMAKNRIIGIDNQMPWHLPADFAWFKKCTMGKPIVMGRKTYESIGRPLPGRLNIVLSRDANLQIDGVTCVTSIEEAK QAAGDIEELMIIGGGSIYQACLSDADKLYLTFIDADINGDTQFPDWGEGWNQTHSETYSKDEKNQYDMEFVVLER >Mature_155_residues MIAAMAKNRIIGIDNQMPWHLPADFAWFKKCTMGKPIVMGRKTYESIGRPLPGRLNIVLSRDANLQIDGVTCVTSIEEAK QAAGDIEELMIIGGGSIYQACLSDADKLYLTFIDADINGDTQFPDWGEGWNQTHSETYSKDEKNQYDMEFVVLER
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=144, Percent_Identity=31.9444444444444, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1786233, Length=156, Percent_Identity=52.5641025641026, Blast_Score=172, Evalue=9e-45, Organism=Drosophila melanogaster, GI116008026, Length=176, Percent_Identity=28.9772727272727, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI24647458, Length=176, Percent_Identity=28.9772727272727, Blast_Score=73, Evalue=9e-14,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 17410; Mature: 17410
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAAMAKNRIIGIDNQMPWHLPADFAWFKKCTMGKPIVMGRKTYESIGRPLPGRLNIVLS CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHCCCCCCCEEEEEE RDANLQIDGVTCVTSIEEAKQAAGDIEELMIIGGGSIYQACLSDADKLYLTFIDADINGD CCCCEEECCEEEEHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCCC TQFPDWGEGWNQTHSETYSKDEKNQYDMEFVVLER CCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MIAAMAKNRIIGIDNQMPWHLPADFAWFKKCTMGKPIVMGRKTYESIGRPLPGRLNIVLS CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHCCCCCCCEEEEEE RDANLQIDGVTCVTSIEEAKQAAGDIEELMIIGGGSIYQACLSDADKLYLTFIDADINGD CCCCEEECCEEEEHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCCC TQFPDWGEGWNQTHSETYSKDEKNQYDMEFVVLER CCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]