| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710720
Identifier: 59710720
GI number: 59710720
Start: 130754
End: 131518
Strand: Reverse
Name: 59710720
Synonym: VF_0113
Alternate gene names: NA
Gene position: 131518-130754 (Counterclockwise)
Preceding gene: 59710723
Following gene: 59710717
Centisome position: 4.54
GC content: 38.95
Gene sequence:
>765_bases ATGATTATAGATGAGTTCATCATGTTAGTTGGATATAAACGAGCACAATGTAAAAAAGTTCTTGTCATCAACCGTAAAGG TGGCGCAGGAAAATCCACGTTTGCAATAGCAATGGCGTCTTTCTACGCTCATCAAAAAGTAAAAACGGAAATCATTGATC TTGACCCTCAAGGTACAAGCCACTTTTGGGGCAGTAAAACCGAAGGGGTAAGAACAACTCGTTTTTTACCATCATCAAAT GTGCCCTTTTCTCTCGCTTTGCGCTTGGAAGCGGACACCAAAATCACAGTGATTGATTCTCCCTCTAACTTTAGTCGTTT TGAGATGGAGAAGTATATTTCTATGGTTGATAAGATCATCTTCCCTGTCCAACCATCACCAATTGATGTGCACTCAATGC TTGGCTTCATTAAAGACTTAATTAATTCCCCTGCGTTTAAGCATAATAATGTTGAGTTAGCCTTTGTTATTACTCGCTGC AAAGAAAACAACCAAGGTACTGAGTTTGTTCATAAAGTGCTGCAGCATATGAAGTACCCGCTTTTAGGTACCATGTCTGA GCATCAAGCATATCAAGAGATGTTTTCAGAAAAGAACTGTTTCTTAGCTCGCTACCCTGAGCTTGATAAACCGCTCTGGA AGAACATGAAAGAGTGGTTAAATGTCGATATGACACAGACAACAAATGTTGAAGATGAAGCGCAAAAAAAAGTGGCTGAT ACGACATCAACCACTTACTCTTCTATTTTGAAAAAGCATTATTAA
Upstream 100 bases:
>100_bases AAATTGTTACTTTTTATGTAACGAGTTCAAACTTTAAGACAGATTACCGTGTCAAACTTGAATTACATGGCATATTGATT GCTTAGTTATAATATTGTCA
Downstream 100 bases:
>100_bases CCCTACTTAAAGGGTTTTAGCATCAATTAGATACCAAACTCAGCACGGTACGCTTTTACGGCTTCTAGTTGCTCAGCATT ATCGCCTTTCTCTTCTAAGA
Product: chromosome partitioning protein ParA
Products: NA
Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; Partition-Related Protein; Partition Protein; ParA Family Protein; Chromosome Partitioning Protein ParA; Partitioning Protein ParA; Chromosome Partitioning-Related ATPase; Partition Protein ParA; Partition-Like Protein
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MIIDEFIMLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQKVKTEIIDLDPQGTSHFWGSKTEGVRTTRFLPSSN VPFSLALRLEADTKITVIDSPSNFSRFEMEKYISMVDKIIFPVQPSPIDVHSMLGFIKDLINSPAFKHNNVELAFVITRC KENNQGTEFVHKVLQHMKYPLLGTMSEHQAYQEMFSEKNCFLARYPELDKPLWKNMKEWLNVDMTQTTNVEDEAQKKVAD TTSTTYSSILKKHY
Sequences:
>Translated_254_residues MIIDEFIMLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQKVKTEIIDLDPQGTSHFWGSKTEGVRTTRFLPSSN VPFSLALRLEADTKITVIDSPSNFSRFEMEKYISMVDKIIFPVQPSPIDVHSMLGFIKDLINSPAFKHNNVELAFVITRC KENNQGTEFVHKVLQHMKYPLLGTMSEHQAYQEMFSEKNCFLARYPELDKPLWKNMKEWLNVDMTQTTNVEDEAQKKVAD TTSTTYSSILKKHY >Mature_254_residues MIIDEFIMLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQKVKTEIIDLDPQGTSHFWGSKTEGVRTTRFLPSSN VPFSLALRLEADTKITVIDSPSNFSRFEMEKYISMVDKIIFPVQPSPIDVHSMLGFIKDLINSPAFKHNNVELAFVITRC KENNQGTEFVHKVLQHMKYPLLGTMSEHQAYQEMFSEKNCFLARYPELDKPLWKNMKEWLNVDMTQTTNVEDEAQKKVAD TTSTTYSSILKKHY
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29117; Mature: 29117
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDEFIMLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQKVKTEIIDLDPQGTS CCHHHHHHHHCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC HFWGSKTEGVRTTRFLPSSNVPFSLALRLEADTKITVIDSPSNFSRFEMEKYISMVDKII CCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHH FPVQPSPIDVHSMLGFIKDLINSPAFKHNNVELAFVITRCKENNQGTEFVHKVLQHMKYP CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCC LLGTMSEHQAYQEMFSEKNCFLARYPELDKPLWKNMKEWLNVDMTQTTNVEDEAQKKVAD CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH TTSTTYSSILKKHY HHHHHHHHHHHHCC >Mature Secondary Structure MIIDEFIMLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQKVKTEIIDLDPQGTS CCHHHHHHHHCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC HFWGSKTEGVRTTRFLPSSNVPFSLALRLEADTKITVIDSPSNFSRFEMEKYISMVDKII CCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHH FPVQPSPIDVHSMLGFIKDLINSPAFKHNNVELAFVITRCKENNQGTEFVHKVLQHMKYP CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCC LLGTMSEHQAYQEMFSEKNCFLARYPELDKPLWKNMKEWLNVDMTQTTNVEDEAQKKVAD CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH TTSTTYSSILKKHY HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA