Click here to switch to the map view.

The map label for this gene is tusA

Identifier: 59710626

GI number: 59710626

Start: 21222

End: 21473

Strand: Reverse

Name: tusA

Synonym: VF_0019

Alternate gene names: 59710626

Gene position: 21473-21222 (Counterclockwise)

Preceding gene: 59710630

Following gene: 59710621

Centisome position: 0.74

GC content: 38.89

Gene sequence:

>252_bases
ATGACCATCAACTTTGATACAGCAACACAAACACTAGAAGCAGAAGGATTACGCTGCCCAGAACCTGTAATGATGGTTAG
AAAAACGATTCGAAAGATGGAAGATGGTGAAACGCTATTAATTAAAGCCGATGACCCATCAACGACAAGAGACATTCCTA
GTTTTTGCCGTTTTATGGATCACGAACTTATCGCAGAAGATACTGATTCCCTTCCTTATCGTTATTTGATCCGAAAAGGA
CTTTCAAAATAA

Upstream 100 bases:

>100_bases
ATTTAATCTACTCCCTTTTCAGTTCTTTGCCAACGCGTATTGATTATTTTTTTTACAGCAGTATGATCTCGGTCGCCTTT
AACTGTAAAGAGATACAAAC

Downstream 100 bases:

>100_bases
TACGTACAAAAAAGGCAACCATAATGGTTGCCTTTCTCTTATAAACTACGTATTGATATCTCGTGCTAGCTTTTGTATAG
CTTCAACTTGATTCTGCAAG

Product: sulfur transfer protein SirA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MTINFDTATQTLEAEGLRCPEPVMMVRKTIRKMEDGETLLIKADDPSTTRDIPSFCRFMDHELIAEDTDSLPYRYLIRKG
LSK

Sequences:

>Translated_83_residues
MTINFDTATQTLEAEGLRCPEPVMMVRKTIRKMEDGETLLIKADDPSTTRDIPSFCRFMDHELIAEDTDSLPYRYLIRKG
LSK
>Mature_82_residues
TINFDTATQTLEAEGLRCPEPVMMVRKTIRKMEDGETLLIKADDPSTTRDIPSFCRFMDHELIAEDTDSLPYRYLIRKGL
SK

Specific function: Could be part of a sulfur-relay system

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family. TusA subfamily

Homologues:

Organism=Escherichia coli, GI1789881, Length=80, Percent_Identity=72.5, Blast_Score=124, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TUSA_VIBF1 (Q5E8Y2)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_203402.1
- ProteinModelPortal:   Q5E8Y2
- SMR:   Q5E8Y2
- STRING:   Q5E8Y2
- GeneID:   3279812
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_0019
- NMPDR:   fig|312309.3.peg.19
- eggNOG:   COG0425
- HOGENOM:   HBG731190
- OMA:   PEPVMLV
- PhylomeDB:   Q5E8Y2
- ProtClustDB:   PRK00299
- BioCyc:   VFIS312309:VF0019-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00413
- InterPro:   IPR001455
- InterPro:   IPR022931
- Gene3D:   G3DSA:3.30.110.40

Pfam domain/function: PF01206 SirA; SSF64307 SirA_like

EC number: NA

Molecular weight: Translated: 9568; Mature: 9437

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS01148 UPF0033

Important sites: ACT_SITE 19-19

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINFDTATQTLEAEGLRCPEPVMMVRKTIRKMEDGETLLIKADDPSTTRDIPSFCRFMD
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH
HELIAEDTDSLPYRYLIRKGLSK
HHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TINFDTATQTLEAEGLRCPEPVMMVRKTIRKMEDGETLLIKADDPSTTRDIPSFCRFMD
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH
HELIAEDTDSLPYRYLIRKGLSK
HHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA