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The map label for this gene is fliY [H]

Identifier: 59710615

GI number: 59710615

Start: 6352

End: 7104

Strand: Reverse

Name: fliY [H]

Synonym: VF_0008

Alternate gene names: 59710615

Gene position: 7104-6352 (Counterclockwise)

Preceding gene: 59710621

Following gene: 59710614

Centisome position: 0.25

GC content: 38.91

Gene sequence:

>753_bases
ATGAAATGGACGAAGAATATCCTCGCAGGATTAGCACTAACATTAGCAACCACTCAATTTGCACAAGCAGCAACAGAAGT
AAAAGTGGGGATGTCAGGACGCTATTTTCCATTTACCTTTGTTAAGCAAGATAAACTGCAAGGATTTGAAGTCGATTTAT
GGGATGAGATTGGTCGCCGCAACGATTATAACGTTGAGTACGTAACTGCTAGCTTTTCAGGTCTTTTCGGCTTATTAGAA
ACGGGGCGAATTGATACGATTTCAAATCAAATTACCAAAACCAAAGAACGTGAAGCAAAGTATCTATTTGCTGACCCTTA
TGTCGTAGATGGTGCGCAAATTACGGTGCGTAAAGGCAATGACAGCATCAAAAGCATTGATGATTTAAATGGTAAAACCG
TTGCCGTTAATTTAGGTTCAAACTTTGAGAAATTACTGCGTGATCACGACAAATCAGAGCAAATCAATATCAAAACATAC
GATACAGGTATTGAGCATGATGTTGCTTTAGGACGTGCAGACGCTTTTGTGATGGATCGACTTTCTGCAGCTCAATTAAT
CAAGAAATCTGGTCTTCCTTTGCAACTAGCTGGTAAACCATTTGAAACCATTGAGAATGCATGGCCATTTGTAAACAATG
AAAAAGGCCAAAAGCTACAAAAAGAAGTGAATCAAGCATTAAACGCCATGAGAGAGGATGGTACATTAGCAAAAATCTCT
CAGAAATGGTTCGATTCAGACATCACTCAATAA

Upstream 100 bases:

>100_bases
ATTTAATGATTTAGTTATTACACATAACCATCGGGTATTTAGAGCTCAGTCGCAAAAAAAGTATCATCCTAATACTGAAT
GAATAATAGGAGTATCAATC

Downstream 100 bases:

>100_bases
GCTAATCTGATCGCAAAGTAAGCGATTACTCACCATTCATCAAATAAGCCCACTATATTACTAGTGGGTTTCATCTTTCT
TTGAATTACCCACTTTACTT

Product: cystine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKWTKNILAGLALTLATTQFAQAATEVKVGMSGRYFPFTFVKQDKLQGFEVDLWDEIGRRNDYNVEYVTASFSGLFGLLE
TGRIDTISNQITKTKEREAKYLFADPYVVDGAQITVRKGNDSIKSIDDLNGKTVAVNLGSNFEKLLRDHDKSEQINIKTY
DTGIEHDVALGRADAFVMDRLSAAQLIKKSGLPLQLAGKPFETIENAWPFVNNEKGQKLQKEVNQALNAMREDGTLAKIS
QKWFDSDITQ

Sequences:

>Translated_250_residues
MKWTKNILAGLALTLATTQFAQAATEVKVGMSGRYFPFTFVKQDKLQGFEVDLWDEIGRRNDYNVEYVTASFSGLFGLLE
TGRIDTISNQITKTKEREAKYLFADPYVVDGAQITVRKGNDSIKSIDDLNGKTVAVNLGSNFEKLLRDHDKSEQINIKTY
DTGIEHDVALGRADAFVMDRLSAAQLIKKSGLPLQLAGKPFETIENAWPFVNNEKGQKLQKEVNQALNAMREDGTLAKIS
QKWFDSDITQ
>Mature_250_residues
MKWTKNILAGLALTLATTQFAQAATEVKVGMSGRYFPFTFVKQDKLQGFEVDLWDEIGRRNDYNVEYVTASFSGLFGLLE
TGRIDTISNQITKTKEREAKYLFADPYVVDGAQITVRKGNDSIKSIDDLNGKTVAVNLGSNFEKLLRDHDKSEQINIKTY
DTGIEHDVALGRADAFVMDRLSAAQLIKKSGLPLQLAGKPFETIENAWPFVNNEKGQKLQKEVNQALNAMREDGTLAKIS
QKWFDSDITQ

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=227, Percent_Identity=38.7665198237885, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=32.9317269076305, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788649, Length=261, Percent_Identity=27.5862068965517, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788648, Length=238, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787085, Length=240, Percent_Identity=25.4166666666667, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787088, Length=243, Percent_Identity=25.5144032921811, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28008; Mature: 28008

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWTKNILAGLALTLATTQFAQAATEVKVGMSGRYFPFTFVKQDKLQGFEVDLWDEIGRR
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCEEHHHHHCCC
NDYNVEYVTASFSGLFGLLETGRIDTISNQITKTKEREAKYLFADPYVVDGAQITVRKGN
CCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCEEECCCEEEEECCC
DSIKSIDDLNGKTVAVNLGSNFEKLLRDHDKSEQINIKTYDTGIEHDVALGRADAFVMDR
CCHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHCCHHHHHHHH
LSAAQLIKKSGLPLQLAGKPFETIENAWPFVNNEKGQKLQKEVNQALNAMREDGTLAKIS
HHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
QKWFDSDITQ
HHHHHCCCCC
>Mature Secondary Structure
MKWTKNILAGLALTLATTQFAQAATEVKVGMSGRYFPFTFVKQDKLQGFEVDLWDEIGRR
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCEEHHHHHCCC
NDYNVEYVTASFSGLFGLLETGRIDTISNQITKTKEREAKYLFADPYVVDGAQITVRKGN
CCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCEEECCCEEEEECCC
DSIKSIDDLNGKTVAVNLGSNFEKLLRDHDKSEQINIKTYDTGIEHDVALGRADAFVMDR
CCHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHCCHHHHHHHH
LSAAQLIKKSGLPLQLAGKPFETIENAWPFVNNEKGQKLQKEVNQALNAMREDGTLAKIS
HHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
QKWFDSDITQ
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA