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The map label for this gene is yecS [H]

Identifier: 59710614

GI number: 59710614

Start: 5556

End: 6227

Strand: Reverse

Name: yecS [H]

Synonym: VF_0007

Alternate gene names: 59710614

Gene position: 6227-5556 (Counterclockwise)

Preceding gene: 59710615

Following gene: 59710613

Centisome position: 0.21

GC content: 39.73

Gene sequence:

>672_bases
ATGGGATTTGATTTTACCTACATGATTGAGTTGTTACCTATATTATTTAAATATTTAGGTACCACAATGGAAATGGCGTT
ATGGGGATTACTCTTTTCCTTAGCCCTTGCGTTAGTACTCGCTAACTTACGAGTATTTAAAGTGCCTGTATTTGATCAAC
TAAGCCAACTCTATATTAGCTTCTTTCGAGGAACGCCATTATTAGTGCAGCTTTTCCTCCTTTATTACGGACTTCCTCAA
GTCTTTCCTATCTTTGTAGGATTAGATGCATTTAGTGCCGCAGTTATAGGCCTTACTCTTCATTTTGCAGCCTACATGGC
TGAGAGCATTCGTGCGGCTATTATTGGTATTGACCGTAGCCAAATGGAAGCCAGTCTTTCTATTGGGATGACAACATCTC
AAGCAATGCGACGCATAATTTTACCTCAAGCAACTCGCGTCGCTCTGCCTTCTTTAATGAATTACTTCATTGATATGATC
AAATCTACCTCTCTAGCTTTTACTTTAGGTGTTGCAGAAATCATGGCAAAAGCACAAATGGAAGCCTCATCTAGCTTTAA
GTTCTTTGAAGCTTTCCTTGCGGTAGCACTTATTTATTGGGGAGTCGTCGTTATTCTGACTCGAGTACAGATTTGGGCCG
AAGAAAAACTAAATAAGGCGTATGTACGATGA

Upstream 100 bases:

>100_bases
ATTACTCACCATTCATCAAATAAGCCCACTATATTACTAGTGGGTTTCATCTTTCTTTGAATTACCCACTTTACTTCTAA
AAATAATTACAGAGAGCATT

Downstream 100 bases:

>100_bases
TAAAAGTTAAAAACTTACATAAGAGCTTTGGCGACACTCAAGTTCTTGCAGGAATCGATCTTGAAATAAACAAAGGAGAG
ATCATTGCTGTTATCGGTTC

Product: cystine transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MGFDFTYMIELLPILFKYLGTTMEMALWGLLFSLALALVLANLRVFKVPVFDQLSQLYISFFRGTPLLVQLFLLYYGLPQ
VFPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMI
KSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNKAYVR

Sequences:

>Translated_223_residues
MGFDFTYMIELLPILFKYLGTTMEMALWGLLFSLALALVLANLRVFKVPVFDQLSQLYISFFRGTPLLVQLFLLYYGLPQ
VFPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMI
KSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNKAYVR
>Mature_222_residues
GFDFTYMIELLPILFKYLGTTMEMALWGLLFSLALALVLANLRVFKVPVFDQLSQLYISFFRGTPLLVQLFLLYYGLPQV
FPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIK
STSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNKAYVR

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=47.1698113207547, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1787030, Length=199, Percent_Identity=33.1658291457286, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=34.5622119815668, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1786874, Length=167, Percent_Identity=32.9341317365269, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=35.5450236966825, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI87082239, Length=198, Percent_Identity=29.7979797979798, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788646, Length=186, Percent_Identity=26.3440860215054, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786873, Length=182, Percent_Identity=30.2197802197802, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787087, Length=213, Percent_Identity=25.3521126760563, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994930, Length=85, Percent_Identity=32.9411764705882, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25020; Mature: 24889

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFDFTYMIELLPILFKYLGTTMEMALWGLLFSLALALVLANLRVFKVPVFDQLSQLYIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
FFRGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS
HHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNKAYVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFDFTYMIELLPILFKYLGTTMEMALWGLLFSLALALVLANLRVFKVPVFDQLSQLYIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
FFRGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS
HHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKLNKAYVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA