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The map label for this gene is smf [H]

Identifier: 58616939

GI number: 58616939

Start: 346122

End: 347249

Strand: Reverse

Name: smf [H]

Synonym: ERGA_CDS_02120

Alternate gene names: 58616939

Gene position: 347249-346122 (Counterclockwise)

Preceding gene: 58616940

Following gene: 58616935

Centisome position: 23.15

GC content: 30.85

Gene sequence:

>1128_bases
ATGCAAATTCAACATAAACTGTCTTATCAAGAACTTGTATCATGTCTTAGACTCATCAGAACACAACATATTGGCCCATC
AACATTTTCTGCATTAATCAAAATATATAAAACATGTAATAACGTATTAGAAGCTCTACCAGAATTAATAAAAAAATCTA
AAGCTTATGACAAGATTAATACTATATGTTCTATTGAAACAGCAGAACAAGAAATTGAAAATACTTATAAAATAGGAGGT
AGAATAATTACAGTATTTGATGAAGATTATCCAGAAAACCTACGCAACATTCATGATTATCCACCTGTATTGACAACATT
AGGAGATATATCACTACTCAAACAAAAAATCATAGCTATAGTAGGCAGTAGGAATCCATCAATTAACGGAAAAAACTTTG
CTTATAAGCTATCTTATGAATTAGCAAATTCAGGGTTTACAATTGTATCAGGACTAGCCAAAGGCATAGATAAGTCTGCA
CACAGCATCATATTTAAACAATTACCTACAATTGCTATAATGGGCAATGGTATTAACATAGTATACCCAGAAGAAAACAC
AACATTATATAATGCAATAACAGATAATGGGGGCTTAATCGCAACAGAATTCCCATTCGCTACGTTACCAAAAGCACAAC
TATTTCCTCAACGTAATCGTATAATCTCTGGATTATCACTAGGAGTAGTAATTGTGGAAGCATCAATGAAATCAGGATCA
TTAATAACAGCAAACTTTGCAATCCATCAGAATAGAGAGGTATTTGCAGTACCTGGATCACCATTTGACTACAGATGTAA
AGGAAGTAATTACTTAATTAAAACAGGATCAGCTAAACTTATAGAACACACAAATGACATAATAGAAAGTCTACAGTTCA
ACACTTATAATTATATACAACATTCCTTATTCGATAATATTATAACAAATTATCAAAGCACAACAGAAATTGACAACGCA
AAAAATCTTATTCTACAACACATAACTCATAGTCCTGTTGAAATCGAAGAGATTATTACTTCAACTAATCTAAGCATTAG
TACTACTTTAATAGCACTAATGGAACTAGAAACATCACATAAAATAGAAAGACTACCTAACAATAAGGTTATGCTTATAC
ATAACTAA

Upstream 100 bases:

>100_bases
TCAGTAGTTCCTAAGTGTTTTTCTACAATGTGTTTATTAATTGTTTGATTGTTTTTAATTAATATTTTAACCTATATCTT
AAGTATAAAATAAATTAATT

Downstream 100 bases:

>100_bases
ATATAATTTTGTTAATATTATTATATATATAATATAGAATAAATGCTCTACAAAATTTACAGTAATACAATATGTATATT
GTATCAAATATTTACAAACG

Product: Smf protein (DNA processing chain A)

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MQIQHKLSYQELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIKKSKAYDKINTICSIETAEQEIENTYKIGG
RIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAIVGSRNPSINGKNFAYKLSYELANSGFTIVSGLAKGIDKSA
HSIIFKQLPTIAIMGNGINIVYPEENTTLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGS
LITANFAIHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQHSLFDNIITNYQSTTEIDNA
KNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSHKIERLPNNKVMLIHN

Sequences:

>Translated_375_residues
MQIQHKLSYQELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIKKSKAYDKINTICSIETAEQEIENTYKIGG
RIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAIVGSRNPSINGKNFAYKLSYELANSGFTIVSGLAKGIDKSA
HSIIFKQLPTIAIMGNGINIVYPEENTTLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGS
LITANFAIHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQHSLFDNIITNYQSTTEIDNA
KNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSHKIERLPNNKVMLIHN
>Mature_375_residues
MQIQHKLSYQELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIKKSKAYDKINTICSIETAEQEIENTYKIGG
RIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAIVGSRNPSINGKNFAYKLSYELANSGFTIVSGLAKGIDKSA
HSIIFKQLPTIAIMGNGINIVYPEENTTLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGS
LITANFAIHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQHSLFDNIITNYQSTTEIDNA
KNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSHKIERLPNNKVMLIHN

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=294, Percent_Identity=35.7142857142857, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41859; Mature: 41859

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQHKLSYQELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIKKSKAYDKIN
CCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TICSIETAEQEIENTYKIGGRIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAI
HHEEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VGSRNPSINGKNFAYKLSYELANSGFTIVSGLAKGIDKSAHSIIFKQLPTIAIMGNGINI
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCEEE
VYPEENTTLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGS
EECCCCCEEEEEEECCCCEEEECCCCCCCCHHHHCCCHHHHHCCCEEEEEEEEECCCCCC
LITANFAIHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQ
EEEEEEEEECCCEEEEECCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
HSLFDNIITNYQSTTEIDNAKNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSH
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
KIERLPNNKVMLIHN
HHHHCCCCCEEEEEC
>Mature Secondary Structure
MQIQHKLSYQELVSCLRLIRTQHIGPSTFSALIKIYKTCNNVLEALPELIKKSKAYDKIN
CCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TICSIETAEQEIENTYKIGGRIITVFDEDYPENLRNIHDYPPVLTTLGDISLLKQKIIAI
HHEEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VGSRNPSINGKNFAYKLSYELANSGFTIVSGLAKGIDKSAHSIIFKQLPTIAIMGNGINI
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCEEE
VYPEENTTLYNAITDNGGLIATEFPFATLPKAQLFPQRNRIISGLSLGVVIVEASMKSGS
EECCCCCEEEEEEECCCCEEEECCCCCCCCHHHHCCCHHHHHCCCEEEEEEEEECCCCCC
LITANFAIHQNREVFAVPGSPFDYRCKGSNYLIKTGSAKLIEHTNDIIESLQFNTYNYIQ
EEEEEEEEECCCEEEEECCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
HSLFDNIITNYQSTTEIDNAKNLILQHITHSPVEIEEIITSTNLSISTTLIALMELETSH
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
KIERLPNNKVMLIHN
HHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]