| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is tkt [H]
Identifier: 57238656
GI number: 57238656
Start: 1710488
End: 1712386
Strand: Direct
Name: tkt [H]
Synonym: CJE1817
Alternate gene names: 57238656
Gene position: 1710488-1712386 (Clockwise)
Preceding gene: 57238655
Following gene: 57238657
Centisome position: 96.21
GC content: 35.91
Gene sequence:
>1899_bases ATGGACATTCAAATTTTACAAGAACAGGCAAATACTCTAAGATTTTTAAGTGCCGATATGGTGCAAAAAGCAAACTCAGG ACACCCAGGTGCACCTTTGGGTTTAGCAGATATTTTAAGTGTTTTAAGTTATCATTTAAAACACAATCCTAAAAATCCCA CTTGGCTAAACCGCGATAGACTTGTATTTTCAGGCGGACATGCAAGTGCTTTGCTTTATAGTTTTTTACATTTAAGCGGC TATGATTTAAGCCTAGAAGATCTTAAAAATTTCCGCCAACTTCATTCTAAAACCCCAGGACACCCTGAAATTTCAACTCT TGGAGTAGAAATCGCTACAGGCCCTTTAGGACAAGGCGTTGCCAATGCTGTAGGCTTTGCTATGGCAGCAAAAAAAGCAC AAAATTTGCTAGGCAGTGATTTAATCGATCATAAAATTTATTGTCTTTGCGGAGATGGGGATTTACAAGAAGGCATTTCT TATGAAGCTTGTTCTTTAGCAGGACTTCACAAACTTGATAACTTCATACTTATTTATGATAGCAACAATATCTCCATAGA AGGCGATGTAGGTTTAGCCTTTAACGAAAATGTAAAAATGCGTTTTGAAGCACAAGGATTTGAAGTTTTAAGTATAAATG GACACGATTATGAAGAAATCAATAAAGCCTTAGAACAAGCTAAAAAATCCACAAAACCTTGTCTTATCATCGCAAAAACA ACTATAGCAAAGGGTGCAGGAGAGCTTGAAGGCAGTCATAAAAGCCATGGCGCACCTTTGGGTGAAGAAGTGATTAAAAA AGCCAAAGAACAAGCAGGTTTTGATCCAAATATCAGTTTTCATATCCCACAAGCAAGCAAAATCCGCTTTGAAAGTGCTG TAGAACTTGGGGATTTAGAAGAAGCAAAATGGAAAGATAAGCTTGAAAAAAGTGCTAAAAAAGAACTTTTAGAAAGGCTA TTAAATCCTGATTTTAACAAGATAGCTTATCCTGATTTTAAAGGAAAAGATCTTGCTACAAGAGATAGTAATGGTGAAAT TTTAAATGTTTTAGCTAAAAATTTAGAAGGATTTTTAGGTGGAAGTGCAGACTTAGGCCCTTCAAACAAAACAGAACTTC ACGGCATGGGAGACTTTGTAGAAGGTAAAAATATCCATTTTGGTATCAGAGAACACGCTATGGCAGCGATTAACAATGCT TTTGCAAGATATGGAATTTTCTTACCATTTTCGGCAACTTTTTTCATCTTTAGCGAGTACTTAAAACCTGCCGCAAGAAT AGCAGCTCTAATGAAAATCAAACATTTTTTCATTTTCACACACGATAGCATAGGCGTGGGCGAAGATGGACCAACACACC AACCTATAGAACAACTTAGCACTTTTAGAGCTATGCCAAATTTTTTAACCTTTAGACCTGCTGATGGGGTGGAAAATGTC AAAGCTTGGCAAATAGCCCTAAATGCTGATATTCCGAGTGCTTTTGTGCTTTCACGCCAAAAACTCAAAGCTCTAAATGA ACCTGTTTTTGGAGATGTAAAAAATGGAGCGTATTTACTCAAAGAAAGCAAAGAGGCTAAATTTACACTTTTAGCAAGTG GAAGTGAAGTTTGGCTTTGTTTAGAAAGTGCAAACGAACTTGAAAAACAAGGTTTTGCTTGTAATGTTGTTTCCATGCCT TGTTTTGAACTTTTTGAAAAACAAGATAAAGCTTATCAAGAAAGATTGTTAAAAGGTGAAGTTATAGGTGTTGAAGCAGC GCATTCTAATGAACTTTATAAATTTTGCCATAAAGTGTATGGCATAGAAAGTTTTGGAGAAAGTGGCAAAGACAAAGATG TGTTTGAACACTTTGGATTTAGCGTTTCAAAGCTTGTAAATTTTATCCTTAGCAAATAA
Upstream 100 bases:
>100_bases AAATCTTCTTAATGAATGCGAACAAGACTTAGAAAAACTTAATGAAAAACTCGCGCAAATGATACAAAATTTAATAATTC AATACTTATAAAGGCAAAAA
Downstream 100 bases:
>100_bases AATGAATACAAATTTCAAATTTCAAAATAACACTCTTTTTATCTTTGGAATTTGGGATAAAACAAGCATTTATAAGTTAA AAATAAAAGATTTTTTAGCT
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSG YDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKT TIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERL LNPDFNKIAYPDFKGKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHGMGDFVEGKNIHFGIREHAMAAINNA FARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENV KAWQIALNADIPSAFVLSRQKLKALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMP CFELFEKQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFEHFGFSVSKLVNFILSK
Sequences:
>Translated_632_residues MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSG YDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKT TIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERL LNPDFNKIAYPDFKGKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHGMGDFVEGKNIHFGIREHAMAAINNA FARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENV KAWQIALNADIPSAFVLSRQKLKALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMP CFELFEKQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFEHFGFSVSKLVNFILSK >Mature_632_residues MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSG YDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKT TIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERL LNPDFNKIAYPDFKGKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHGMGDFVEGKNIHFGIREHAMAAINNA FARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENV KAWQIALNADIPSAFVLSRQKLKALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMP CFELFEKQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFEHFGFSVSKLVNFILSK
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=591, Percent_Identity=28.4263959390863, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4507521, Length=591, Percent_Identity=28.4263959390863, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI133778974, Length=645, Percent_Identity=26.046511627907, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI225637459, Length=650, Percent_Identity=24.3076923076923, Blast_Score=146, Evalue=7e-35, Organism=Homo sapiens, GI225637463, Length=540, Percent_Identity=24.8148148148148, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI225637461, Length=540, Percent_Identity=24.8148148148148, Blast_Score=132, Evalue=1e-30, Organism=Escherichia coli, GI48994911, Length=654, Percent_Identity=44.954128440367, Blast_Score=526, Evalue=1e-150, Organism=Escherichia coli, GI1788808, Length=651, Percent_Identity=43.778801843318, Blast_Score=492, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17539652, Length=594, Percent_Identity=29.6296296296296, Blast_Score=208, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6325331, Length=642, Percent_Identity=44.8598130841121, Blast_Score=483, Evalue=1e-137, Organism=Saccharomyces cerevisiae, GI6319593, Length=642, Percent_Identity=40.9657320872274, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI45551847, Length=651, Percent_Identity=26.2672811059908, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI45550715, Length=651, Percent_Identity=26.2672811059908, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24666278, Length=598, Percent_Identity=27.257525083612, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI24645119, Length=615, Percent_Identity=25.6910569105691, Blast_Score=170, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 69589; Mature: 69589
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCC LVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGV EEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHH ANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYD HHHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCCHHHCCCCCHHHHHHHHHCCCEEEEEE SNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKT CCCEEEECCEEEEECCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEC TIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISFHIPQASKIRFESAVELGDLE HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHCCHHHHCCCCCCH EAKWKDKLEKSAKKELLERLLNPDFNKIAYPDFKGKDLATRDSNGEILNVLAKNLEGFLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GSADLGPSNKTELHGMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSATFFIFSEY CCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHH LKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENV HHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCC KAWQIALNADIPSAFVLSRQKLKALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLC EEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEE LESANELEKQGFACNVVSMPCFELFEKQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVY ECCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH GIESFGESGKDKDVFEHFGFSVSKLVNFILSK CHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCC LVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGV EEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHH ANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYD HHHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCCHHHCCCCCHHHHHHHHHCCCEEEEEE SNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKT CCCEEEECCEEEEECCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEC TIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISFHIPQASKIRFESAVELGDLE HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHCCHHHHCCCCCCH EAKWKDKLEKSAKKELLERLLNPDFNKIAYPDFKGKDLATRDSNGEILNVLAKNLEGFLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GSADLGPSNKTELHGMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSATFFIFSEY CCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHH LKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENV HHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCC KAWQIALNADIPSAFVLSRQKLKALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLC EEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEE LESANELEKQGFACNVVSMPCFELFEKQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVY ECCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH GIESFGESGKDKDVFEHFGFSVSKLVNFILSK CHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]