Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 57238657

GI number: 57238657

Start: 1712388

End: 1713497

Strand: Direct

Name: yrbE [C]

Synonym: CJE1818

Alternate gene names: 57238657

Gene position: 1712388-1713497 (Clockwise)

Preceding gene: 57238656

Following gene: 57238658

Centisome position: 96.32

GC content: 31.08

Gene sequence:

>1110_bases
ATGAATACAAATTTCAAATTTCAAAATAACACTCTTTTTATCTTTGGAATTTGGGATAAAACAAGCATTTATAAGTTAAA
AATAAAAGATTTTTTAGCTTTGATCCAAAGCAAGGAAGTGATTTTTGATTTTAAAGATCTAAAAGCAATCGATACCGCTG
GAGTGAGATTTTTCCTTGCTTTGGAAAACGACCTTAAAGATAAAAATATTAAAATCACCAAAGAAGGCTTAAATTCACGC
TTTCAAACCCTTTTTGAACTTTGTGAAAAAAACTACCAAAGACTAAGCAAAACAAAAAAATCACATAAAAATTTCAGTGA
ATACTTTATCGATCTTGGAAAATTAAGTTTAGAACTTTTAAAAATTTTAAGAAAATTCATCAATTTCACAGGAGCTTTTT
TCACAAGTCTTTTTTTATGCCTTAAAAATCCTAAAAATTTTCGCTTTATTGCTTTTTTATATCATATAGAAAATTCTGCT
TTTAAAGCCTTACCTATAGTTATTTTAACCGCTCTTTTAGTAGGAGTGGTTTTAGCCTATCAGGCTGCTTATCAACTCGC
ACAATTTGGAGCCAATATTTTCATAGTGGATTTGATGGGAATTTCAGCCACTAGAGAACTTGCACCTTTAATCGCTGCCA
TAGTGATCGCAGGAAGAAGTGCAAGTTCTTATACCGCACAAATTGGAGTGATGAAAATTACTGATGAAATTGCAGCTATG
AATACTATGGGTTTTCGTTCTTTTGAATTTATTATTATTCCACGTGTCATGGCTTTGATAGTGGCTATGCCTTTAATCGT
TGCCATTAGCGATGCGATCAGTATTATAGGTGGAATGATGGTTGCAAAATTAAATCTTGATATTTCTTTTGCCGAATTTT
TAAGACGTTTTAGAGAGGCTGTAGATATAAAACATATCTTTATAGGACTTGCAAAAGCACCTATTTTTGGATTTTTGATA
GGACTTATTGCTTGTTTTCGTGGTTTTGAGGTAAAAAACACTACACAAAGCATAGGAATTTATACAACAAAAAGCGTTGT
AAATGCTATTTTTTGGGTGATAGCTTTTGATGCTTTATTCTCTGTTGTTTTAACTTCTGCAGGAATTTAA

Upstream 100 bases:

>100_bases
GGCATAGAAAGTTTTGGAGAAAGTGGCAAAGACAAAGATGTGTTTGAACACTTTGGATTTAGCGTTTCAAAGCTTGTAAA
TTTTATCCTTAGCAAATAAA

Downstream 100 bases:

>100_bases
ATGGTTATTAAAGCGCAAAATATCATTACAAAATTTGGAGAAAAAATTGTCCATGATGGCGTAAGTTTTGAAATCAAAAA
AAACGAAATTTTTGGTATTT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKAIDTAGVRFFLALENDLKDKNIKITKEGLNSR
FQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLI
GLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI

Sequences:

>Translated_369_residues
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKAIDTAGVRFFLALENDLKDKNIKITKEGLNSR
FQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLI
GLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI
>Mature_369_residues
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKAIDTAGVRFFLALENDLKDKNIKITKEGLNSR
FQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLI
GLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=249, Percent_Identity=29.3172690763052, Blast_Score=101, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41438; Mature: 41438

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKAIDTAGVRFFLA
CCCCEEEECCEEEEEEECCCCCEEEEEHHHHHHHHHCCHHEEEHHHHHHHHHCCEEEEEE
LENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELL
ECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSAFKALPIVILTALLVGVVLAY
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHH
NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH
VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
SVVLTSAGI
HHHHHHCCC
>Mature Secondary Structure
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKAIDTAGVRFFLA
CCCCEEEECCEEEEEEECCCCCEEEEEHHHHHHHHHCCHHEEEHHHHHHHHHCCEEEEEE
LENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELL
ECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSAFKALPIVILTALLVGVVLAY
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHH
NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH
VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
SVVLTSAGI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA