| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is putP [H]
Identifier: 57238525
GI number: 57238525
Start: 1572627
End: 1574096
Strand: Reverse
Name: putP [H]
Synonym: CJE1675
Alternate gene names: 57238525
Gene position: 1574096-1572627 (Counterclockwise)
Preceding gene: 57238526
Following gene: 57238521
Centisome position: 88.54
GC content: 34.49
Gene sequence:
>1470_bases ATGGAAGTGGTTCAAATTAATACCCCAATAGCAGTGATGTTTGTAGTGTATGCCTTATTAATGCTTTATATAGGTTTTTA TTTTTATAAGCAAAATAAAAATTCAGAGGATTATTTTCTAGGTGGGCGTACTATGGGGCCTGTGATATCTGCACTTAGCG CAGGGGCTTCTGATATGAGTGGTTGGCTTTTAATGGGTTTACCGGGAGCTTTATATGTAAGTGGTTTTATAGATTCTTAT ATTGCAATTGGGCTTACTATAGGAGCTAGTTTAAATTGGATTTTTGTGGCAAAAAGACTTAGAATTTATACCAGTGTGAT TGCAAATTCTTTGACTATTCCTGATTATTTTGAAACTCGTTTTGATGATGATAAACATATACTGCGCATCGTATGTGCGG TGGTAATTTTGATATTTTTTACCTTTTATGTTTCATCAGGGCTTGTAAGCGGAGCAAAACTTTTTGAAAGTACTTTTGGT ATCAGATACGATTATGCTTTAACTACTGGAACGATTATTATTGTTGCTTATACTTTTTTAGGTGGATATAAGGCGGTTTG TTGGACGGATATGATACAAGGACTTTTAATGATGATAGCTTTAATTATTGTACCTTTGGTTATGCTTTATCATTTAGGTG GCTTTGGTGAAGCGATGAATATAGTAAAAGAAATAAAACCACAAGCTTTATCTATGGGCGAAGGAGTAGGAGTTATAAGT ATTATATCTGCACTTGCTTGGGGTTTGGGTTATTTTGGTCAACCACATATTTTAGTGCGTTTTATGTCGATTCGTTCTAC TAAAGATATTCCTATGGCCACTTTTATAGGTATTGCTTGGATGGCGGTTTGTCTTTTAAGTGCTTGTATGATAGGTATTT TGGGCATAGCTTATGTGCATAAATTTGAATTAAGTTTGCAAGATCCTGAAAAGATTTTCATCGTGATGTCGCAGCTTTTA TTTAATCCTTGGATAGCAGGTATTTTACTCAGTGCTATTTTAGCGGCTATTATGAGTACGGCAAGTTCACAATTGCTGGT TTCAAGTTCTACTATAGCGGAAGATTTTTATAAAAAGATTTTTAGAGAAGATGCACCAAGTCATATTGTATTAAATTTAG GTAAATTAGGTGTTTTATTGGTAGCTGTAATAGCGTTTTTGATTTCTACTGATAAAAACTCAAGTGTTTTGAGTATAGTT TCTTATGCATGGGCTGGATTTGGAGCTTCTTTTGGTTCTGTAATGCTTTTTTCTTTATTTTGGAGTAGGATGACAAGAGT AGGAGCGATCTTAGGTATGATAACAGGAGCTGCTACTGTGGTGCTTTGGAAGAATTTTGCAAATTCAGGTCTTTATGAAA TAGTTCCAGGGTTTTTAGCAGCTTCGGCGGTGATTATTATTGCAAGTTTGTTTACAAATGTAAGATCTGGAACTAAAGCA GCTTATGAAAAGATGTTAAAAGAGCTTTGA
Upstream 100 bases:
>100_bases AACTTTTAAATTATTTTAATGAAAAAGCTTTAAGTATATCTTTTCATCGTTATGGAAATTTAGGCATTAGAGCAATATCT TAATGATCAAGGAGAGATTG
Downstream 100 bases:
>100_bases GAACAAAAGCCTTTTTTAAGGCTTTTGTATTAAAAATCTTAGCGTGGGTCCACTTTGATCGATTTCAAGCACTTTAAAAC CACGGTTTTTTACATCTTGA
Product: sodium/proline permease
Products: NA
Alternate protein names: Proline permease; Propionate transporter [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRTMGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSY IAIGLTIGASLNWIFVAKRLRIYTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMIALIIVPLVMLYHLGGFGEAMNIVKEIKPQALSMGEGVGVIS IISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFIGIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLL FNPWIAGILLSAILAAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHIVLNLGKLGVLLVAVIAFLISTDKNSSVLSIV SYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSGLYEIVPGFLAASAVIIIASLFTNVRSGTKA AYEKMLKEL
Sequences:
>Translated_489_residues MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRTMGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSY IAIGLTIGASLNWIFVAKRLRIYTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMIALIIVPLVMLYHLGGFGEAMNIVKEIKPQALSMGEGVGVIS IISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFIGIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLL FNPWIAGILLSAILAAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHIVLNLGKLGVLLVAVIAFLISTDKNSSVLSIV SYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSGLYEIVPGFLAASAVIIIASLFTNVRSGTKA AYEKMLKEL >Mature_489_residues MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRTMGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSY IAIGLTIGASLNWIFVAKRLRIYTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMIALIIVPLVMLYHLGGFGEAMNIVKEIKPQALSMGEGVGVIS IISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFIGIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLL FNPWIAGILLSAILAAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHIVLNLGKLGVLLVAVIAFLISTDKNSSVLSIV SYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSGLYEIVPGFLAASAVIIIASLFTNVRSGTKA AYEKMLKEL
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline. This protein is also capable of using lithium as the transport cation. Also catalyzes the uptake of propionate [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=474, Percent_Identity=48.1012658227848, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI256985183, Length=345, Percent_Identity=25.2173913043478, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI4507035, Length=379, Percent_Identity=22.9551451187335, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1787251, Length=487, Percent_Identity=51.7453798767967, Blast_Score=487, Evalue=1e-139, Organism=Escherichia coli, GI87082237, Length=488, Percent_Identity=26.844262295082, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1790503, Length=457, Percent_Identity=23.8512035010941, Blast_Score=113, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17539284, Length=412, Percent_Identity=25, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24645928, Length=387, Percent_Identity=26.8733850129199, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI221459588, Length=397, Percent_Identity=26.9521410579345, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI221459584, Length=386, Percent_Identity=25.1295336787565, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI221459586, Length=420, Percent_Identity=24.2857142857143, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24651741, Length=460, Percent_Identity=23.9130434782609, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI221459582, Length=415, Percent_Identity=26.2650602409639, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24648033, Length=404, Percent_Identity=21.7821782178218, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI21356865, Length=404, Percent_Identity=21.7821782178218, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI281362918, Length=219, Percent_Identity=27.8538812785388, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53303; Mature: 53303
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRTMGPVISALSAGASDMS CCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCC GWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRIYTSVIANSLTIPDYFETR CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHC FDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFGIRYDYALTTGTIIIVAYTFL CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH GGYKAVCWTDMIQGLLMMIALIIVPLVMLYHLGGFGEAMNIVKEIKPQALSMGEGVGVIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCHHHH IISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFIGIAWMAVCLLSACMIGILGIAYVH HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFELSLQDPEKIFIVMSQLLFNPWIAGILLSAILAAIMSTASSQLLVSSSTIAEDFYKKI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FREDAPSHIVLNLGKLGVLLVAVIAFLISTDKNSSVLSIVSYAWAGFGASFGSVMLFSLF HHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH WSRMTRVGAILGMITGAATVVLWKNFANSGLYEIVPGFLAASAVIIIASLFTNVRSGTKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AYEKMLKEL HHHHHHHHC >Mature Secondary Structure MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRTMGPVISALSAGASDMS CCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCC GWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRIYTSVIANSLTIPDYFETR CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHC FDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFGIRYDYALTTGTIIIVAYTFL CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH GGYKAVCWTDMIQGLLMMIALIIVPLVMLYHLGGFGEAMNIVKEIKPQALSMGEGVGVIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCHHHH IISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFIGIAWMAVCLLSACMIGILGIAYVH HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFELSLQDPEKIFIVMSQLLFNPWIAGILLSAILAAIMSTASSQLLVSSSTIAEDFYKKI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FREDAPSHIVLNLGKLGVLLVAVIAFLISTDKNSSVLSIVSYAWAGFGASFGSVMLFSLF HHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH WSRMTRVGAILGMITGAATVVLWKNFANSGLYEIVPGFLAASAVIIIASLFTNVRSGTKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AYEKMLKEL HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3302614; 8905232; 9278503; 1400239; 3325781; 3053687; 3053649; 1567896; 8119910 [H]