| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238388
Identifier: 57238388
GI number: 57238388
Start: 1430180
End: 1431574
Strand: Reverse
Name: 57238388
Synonym: CJE1534
Alternate gene names: NA
Gene position: 1431574-1430180 (Counterclockwise)
Preceding gene: 57238389
Following gene: 57238387
Centisome position: 80.52
GC content: 32.62
Gene sequence:
>1395_bases ATGAAATTTTTTTTAACAATTTTATTTTTTATAACAAGCATTTTTGCTTTAGAGCTAGACTTTAGCGTAGGAGAAAATGG AAAAAGTCTAGATGATAATAATACAGTTTTAATTTTTGGTGGAATTCAAGGCGATGAGCCTGGTGGATTTCATGCGGCAA GTTTGCTTTTGAGTGATTATAATATCACTAAGGGTAAGATTATAGTGGCTCCAAATTTAGCTTTTGATAGCATTATCAAG CGTTCTCGTGGGAATAATGGGGATTTAAACCGTAAATTTGCAAGCATTAGCCCAAAAGATCCTGATTATAAAACCGTTCA ACGCATTAAAGAGCTTATTTTACTTCCTGAAGTTAGTATGGTGATCAATCTTCACGATGGTTGGGGTTTTTATAAACCCA CTTATATCGATGCGATGCAAAATCCTAAGCGTTGGGGAAATTCAAGCGTGATTGATACAAGCGAAATCAATGCAAGCAAA TACCCTGATCTTGAAAATATCGCCACTCAAACCGTAAATAGTGTCAATTCTTCGCTTGCTGATCCAAAGCATGCTTATCA TCTTAAAAACACCAAAACCCAAGAGCTTGGCGATACGGAAATGCTTAAAGCTTTAACTTATTTTGTGATTTCAAATCACA AAGCCGCTTTTGCAAATGAAGCGAGTAAAAATCTGCCTGTAAATTTAAGAGCTTATTATCATCTTTTGGCAATTGAAAAT TATTTAAAAACTGCAGGAATTGAATTTAGCAGAGATTTCGAACTCACTCCGCAAGGAGTTGATAAAGCCATAAATAAAGA GCTTGAAGTAAAACTTTTTGATGATAGAATTTTACTTTCTTTAAAAAATCCAAGAAAGCTTATCAACTATGTGCCTTTTC CGGTAAATAAAGAGTTAAATTATAACACAAGCAATGAACTTACGGCTGTTATCGCAGAAGGAAATTCTTTTTATATCCAA TATGGCAATCGTTTTCAAACAAGATTATATCCTGAGTATTTAGAATTTAGCGATGCTTTTAATGAAGTAACTTTTCAAGT TGATGGCAATGAAACCACAGTTCCTTTTGGAACCAAGGTAAAAGTAAAAGAGAATTTTCTTATTCCAAAGATAGCTAATG TGCGCGTAAATATCATAGGCTTTGATCACTCAAAAGATGAAAGTGGTATTTTAGTTCATAAAAAAAATATGCAAACACAA TACTCTTTAGACATGGCAGGTAAAATTTATAGAGTGGAATTTTATGAGTTAAGAGGTGCAAATTTGCAACAACTTTTAGA GGCAAATATCAATAGCAAGTTGATCAAAAACGCTAAAAATTTGGATTTAAATACTCTTAAAATGGCAAGATCAAAAGATA AATTCTTAGGTTCTATTTTAGTGGAATTTGAATGA
Upstream 100 bases:
>100_bases ATTTTTAAAGCCCTTGATCATTTTGGAGTACCTAAAATTTCAAGCATAGAAGAAGTTTTTGAGTATGATTTTAAAACAAG AGAGTATTTAAGGAGTTAAA
Downstream 100 bases:
>100_bases AAAATCTTATCCTAGCTATAGAAAGTTCTTGTGATGATAGTTCTATAGCTATCATTGATAAAAATACATTAGAATGTAAA TTTCATAAAAAAATTTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Succinylglutamate Desuccinylase/Aspartoacylase; Tat Pathway Signal Sequence Domain Protein; Purine Nucleoside Phosphorylase; Secreted Protein
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQGDEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIK RSRGNNGDLNRKFASISPKDPDYKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFANEASKNLPVNLRAYYHLLAIEN YLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDRILLSLKNPRKLINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQ YGNRFQTRLYPEYLEFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILVHKKNMQTQ YSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMARSKDKFLGSILVEFE
Sequences:
>Translated_464_residues MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQGDEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIK RSRGNNGDLNRKFASISPKDPDYKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFANEASKNLPVNLRAYYHLLAIEN YLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDRILLSLKNPRKLINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQ YGNRFQTRLYPEYLEFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILVHKKNMQTQ YSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMARSKDKFLGSILVEFE >Mature_464_residues MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQGDEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIK RSRGNNGDLNRKFASISPKDPDYKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFANEASKNLPVNLRAYYHLLAIEN YLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDRILLSLKNPRKLINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQ YGNRFQTRLYPEYLEFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILVHKKNMQTQ YSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMARSKDKFLGSILVEFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52538; Mature: 52538
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQGDEPGGFHAASLLLSDY CHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHEEEECC NITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPDYKTVQRIKELILLPEVSM CCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEE VINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASKYPDLENIATQTVNSVNSSLA EEEEECCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC DPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFANEASKNLPVNLRAYYHLLAIEN CCCCEEEECCCCCHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEHHHHHHHHHHHH YLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDRILLSLKNPRKLINYVPFPVNKELN HHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHCCCCCCCCCCC YNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYLEFSDAFNEVTFQVDGNETTVPFGTKV CCCCCCEEEEEECCCEEEEEECCEEEEEECHHHHHHHCCCCEEEEEECCCCEECCCCCEE KVKENFLIPKIANVRVNIIGFDHSKDESGILVHKKNMQTQYSLDMAGKIYRVEFYELRGA EEECCCCCCEECCEEEEEEEECCCCCCCCEEEEECCCCEEEEECCCCEEEEEEEEEECCC NLQQLLEANINSKLIKNAKNLDLNTLKMARSKDKFLGSILVEFE CHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEEC >Mature Secondary Structure MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQGDEPGGFHAASLLLSDY CHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHEEEECC NITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPDYKTVQRIKELILLPEVSM CCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEE VINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASKYPDLENIATQTVNSVNSSLA EEEEECCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC DPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFANEASKNLPVNLRAYYHLLAIEN CCCCEEEECCCCCHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEHHHHHHHHHHHH YLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDRILLSLKNPRKLINYVPFPVNKELN HHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHCCCCCCCCCCC YNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYLEFSDAFNEVTFQVDGNETTVPFGTKV CCCCCCEEEEEECCCEEEEEECCEEEEEECHHHHHHHCCCCEEEEEECCCCEECCCCCEE KVKENFLIPKIANVRVNIIGFDHSKDESGILVHKKNMQTQYSLDMAGKIYRVEFYELRGA EEECCCCCCEECCEEEEEEEECCCCCCCCEEEEECCCCEEEEECCCCEEEEEEEEEECCC NLQQLLEANINSKLIKNAKNLDLNTLKMARSKDKFLGSILVEFE CHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA