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The map label for this gene is 57238128

Identifier: 57238128

GI number: 57238128

Start: 1306529

End: 1307011

Strand: Direct

Name: 57238128

Synonym: CJE1391

Alternate gene names: NA

Gene position: 1306529-1307011 (Clockwise)

Preceding gene: 57238127

Following gene: 57238130

Centisome position: 73.49

GC content: 30.64

Gene sequence:

>483_bases
GTGAGTGAATTTCTAACTCATCCTTTTGAGCCTTTTTTTGACAAAGATTCTAAAATCTTAATTTTAGGATCTTTTCCTTC
GGTAAAATCAAGACAAGATGGCTTTTATTATCAACACCCAAGAAATCGTTTTTGGCCTATACTAGAAACACTTTTTGATG
TAAGATTAGAAAATATCACAGAACAACAAGCCTTTTTAAGAAAAAAACATATCGCTCTTTGGGATGTACTTCAAAGTTGC
AAGATAAAAAATTCAGATGATAAAACTATAAGTTATGCAAAAGCCAATGATTTAAGCCCGATCCTTTCTCAAACCAAAAT
CCAAGCCATTTTTACTACTGGACAAAGTGCTTATAAATTTTTTATTAAATTCCACCCTCGCTTAAAAGCCATAGCCCTAC
CCTCAACTTCTCCTGCAAATTTAAATTTTTCTTTTGAACAGCTTTTGCAAAACTATGAAATAATCAAAAAATTTACAAAA
TAA

Upstream 100 bases:

>100_bases
ATAGTTCAAAAAGCAAGCATCTTAATTTAAGCGAAAACCAAAGCTTAAAAGTTAAAATCAGCGAAATTAAAAACGGAAAA
ATTTCTGTGGATTTGTGTGA

Downstream 100 bases:

>100_bases
CAAACTAAGCATTACCCCCCCCCCCAAAAAAAAGTAAAACAAGAAAAAAGCTAGTTAATATCTAGCTTTTGCGTGTTATC
CTTGAATTCAAATTCCACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Mug GT/U Mismatch-Specific DNA Glycosylase; T/U Mismatch-Specific DNA Glycosylase; Uracil-DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Superfamily Protein; G/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRFWPILETLFDVRLENITEQQAFLRKKHIALWDVLQSC
KIKNSDDKTISYAKANDLSPILSQTKIQAIFTTGQSAYKFFIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK

Sequences:

>Translated_160_residues
MSEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRFWPILETLFDVRLENITEQQAFLRKKHIALWDVLQSC
KIKNSDDKTISYAKANDLSPILSQTKIQAIFTTGQSAYKFFIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
>Mature_159_residues
SEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRFWPILETLFDVRLENITEQQAFLRKKHIALWDVLQSCK
IKNSDDKTISYAKANDLSPILSQTKIQAIFTTGQSAYKFFIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18743; Mature: 18612

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRFWPILETLFDVRLENIT
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
EQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLSPILSQTKIQAIFTTGQSAYKF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCHHHEEE
FIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
EEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRFWPILETLFDVRLENIT
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
EQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLSPILSQTKIQAIFTTGQSAYKF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCHHHEEE
FIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
EEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA