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The map label for this gene is tpn32 [H]

Identifier: 57238072

GI number: 57238072

Start: 1250006

End: 1250794

Strand: Direct

Name: tpn32 [H]

Synonym: CJE1334

Alternate gene names: 57238072

Gene position: 1250006-1250794 (Clockwise)

Preceding gene: 57238071

Following gene: 57238073

Centisome position: 70.31

GC content: 32.07

Gene sequence:

>789_bases
TTGCATAAAGGAGAAAAAATGACTTTATTTACTAAAGCTTTTTGCGTCGCTACTCTTTTTACCGGTTTTGCATGGGCAAA
TGAAGAACTTAAAGTTGGCTCTTCTATAACACCTCATGCAGATATTTTAAGATTTATAAAATCAGCACTTCAAAAACAAG
GTTATGATTTAAAAATTTATGAATTTAATGATGGGGTAATCCCTAATGTAATGGTTGAAAATGGTGAGTTAGATGCTAAT
TATTTTCAGCATGAACCTTATTTAAAAGAATTCAATCAAAGGCAAGGCACCCATCTTGTAAAAGTTGCCAGTATCCATAT
AGAACCTATGGCAGTGTATTCAAAAAAATATAAAGAATTTAACCCAGAGGAAGGACAAAGCATTTCTATACCCAATAATC
CTACAAATGAAAGCCGTGCTTTACGCATTGTAGCAAGCAAAGGACTTATAGAAGTTAAGGATAATGAGCTCATCACTCCT
TTAGATATCACTAAAAATCCTAAGAAGCTTAAATTTGTAGAGTTAAAAGACGCTCAACTTACAAGGAGTTTAAATGATGT
AGATTATTCTCTTATTAATAGCAATTTTGCTATTTTAGCAGGTTTAAACCCTGTAAAAGATGGGCTTTATACAGAAAGTA
AATATAGTGAATATGGCAATATCATCGCCGTTAAAGAAGGTAATGAAAACCTTCCTAAAATCAAAGCCCTAGTAAAGGCC
TTGCAAAGCGATGAAGTTAAAAAATTTATAGAAGAAAAATATCAGGGTGCTTTAATCCCTACATTTTAA

Upstream 100 bases:

>100_bases
CTTTTAAGAAATGTTGCAAGTAATTATTTTAAAAGAATGATACGCTCTCATCCTGATGTAGCAAGTATTTATCATAGTGA
CTTGATAGAAAAATTTAGTT

Downstream 100 bases:

>100_bases
GGAGAACAAATATGAAAAATTCAATCATTTCTTACCCAAGAATAGGTGCAAATAGAGAATTAAAATTTGCTATTGAAAAA
TACTTTAAAAACCAAAGTTC

Product: NLPA family lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MHKGEKMTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSALQKQGYDLKIYEFNDGVIPNVMVENGELDAN
YFQHEPYLKEFNQRQGTHLVKVASIHIEPMAVYSKKYKEFNPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITP
LDITKNPKKLKFVELKDAQLTRSLNDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAVKEGNENLPKIKALVKA
LQSDEVKKFIEEKYQGALIPTF

Sequences:

>Translated_262_residues
MHKGEKMTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSALQKQGYDLKIYEFNDGVIPNVMVENGELDAN
YFQHEPYLKEFNQRQGTHLVKVASIHIEPMAVYSKKYKEFNPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITP
LDITKNPKKLKFVELKDAQLTRSLNDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAVKEGNENLPKIKALVKA
LQSDEVKKFIEEKYQGALIPTF
>Mature_262_residues
MHKGEKMTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSALQKQGYDLKIYEFNDGVIPNVMVENGELDAN
YFQHEPYLKEFNQRQGTHLVKVASIHIEPMAVYSKKYKEFNPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITP
LDITKNPKKLKFVELKDAQLTRSLNDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAVKEGNENLPKIKALVKA
LQSDEVKKFIEEKYQGALIPTF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=218, Percent_Identity=40.8256880733945, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1790093, Length=221, Percent_Identity=40.7239819004525, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29594; Mature: 29594

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKGEKMTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSALQKQGYDLKIY
CCCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
EFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIEPMAVYSKKYKEF
ECCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHCC
NPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKNPKKLKFVELKDAQL
CCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCEECCCCCCCCCCEEEEEEECHHHH
TRSLNDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAVKEGNENLPKIKALVKA
HHHHHHCCHHHHCCCEEEEECCCHHHCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHH
LQSDEVKKFIEEKYQGALIPTF
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHKGEKMTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSALQKQGYDLKIY
CCCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
EFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIEPMAVYSKKYKEF
ECCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHCC
NPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKNPKKLKFVELKDAQL
CCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCEECCCCCCCCCCEEEEEEECHHHH
TRSLNDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAVKEGNENLPKIKALVKA
HHHHHHCCHHHHCCCEEEEECCCHHHCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHH
LQSDEVKKFIEEKYQGALIPTF
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]