| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is efe [H]
Identifier: 57238071
GI number: 57238071
Start: 1249021
End: 1250013
Strand: Direct
Name: efe [H]
Synonym: CJE1333
Alternate gene names: 57238071
Gene position: 1249021-1250013 (Clockwise)
Preceding gene: 57238070
Following gene: 57238072
Centisome position: 70.26
GC content: 31.42
Gene sequence:
>993_bases ATGAATTTACCTATACTTGATTTACAAGCTTATGAAAAAGATAAAAGCACTTTTCTTAAAAATTTAAGAGAAATTGCTTC TAAAATAGGTTTTTTTTATCTTATCAATACCAGTATAGATAAAAATTTAAACGAGAAATTATTCAAACTTGGCAAAGAAT TTTTTAATCTTTCTAGAAGTTCGAAAGAGCTTATTTCTATGGTACATTCTCCTCAATTTAGAGGTTATACTAGCGAAGGT TTTGAATACACAGCAGGAACTAAGGATTATAGAGAACAACTGGATATAGGCACAGAAAGAGATGCTTTAAACTGGAATTT AAACTCACCCTTATGGCAAAGACTAGAAGGTCCTAATCTTTGGCCTAGTGAAATTCCAGAACTTAAAAAAACTTTCTTAA CTTGGCACAAACAAACCAAAAAAGCTTGTTTAAAGCTTTTAAAAACCTTTGCTCAAGCTCTTGATCTACCTAGCAATGCT TTTGATAAACTTTATGGAGAAAATTCTTACGAACATTGTAAAATCATACATTATCCAAAAAGCTCAAAAAATATCACTCA AGGCGTAGGTTCACATAAAGATGGTGGGCTTATCACTTTTGTTTTTCAAGAAAAACAAAGTGGACTTGAAGCTTTTATAG ATGGTAAATGGCTTAGTATACCCCCACTTGAAAATAGCGTTGTAGTTAATATAGGAGAATTTTTAGAACTAGCTACCAAT GGCTATTTAAAAGCTACTATTCACCGCGTGAATTTAAGCCCAAAAGAACGCTTTAGCATAGCTTATTTTCTTGGAGTGCA ACTTGATAAGGATATACCTATTTTTAAGTTAAATCCAGAGCTTGCCAAAGAAAGCAAAGGTGTGGATACTGATCCTAAAA ATCCACTTTTAAGAAATGTTGCAAGTAATTATTTTAAAAGAATGATACGCTCTCATCCTGATGTAGCAAGTATTTATCAT AGTGACTTGATAGAAAAATTTAGTTTTGCATAA
Upstream 100 bases:
>100_bases TTTCAAAATACTCATTTAAAATCTTAACTTACAAAAATTTCTCTAATAAAATTTAATTCAAAATATCTTCTTATCCTTAA TTTTAATTTAAGGAGCAAAA
Downstream 100 bases:
>100_bases AGGAGAAAAAATGACTTTATTTACTAAAGCTTTTTGCGTCGCTACTCTTTTTACCGGTTTTGCATGGGCAAATGAAGAAC TTAAAGTTGGCTCTTCTATA
Product: 2OG-Fe(II) oxygenase family oxidoreductase
Products: NA
Alternate protein names: EFE; Ethylene-forming enzyme [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLNEKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEG FEYTAGTKDYREQLDIGTERDALNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKTFAQALDLPSNA FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGLEAFIDGKWLSIPPLENSVVVNIGEFLELATN GYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFKLNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYH SDLIEKFSFA
Sequences:
>Translated_330_residues MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLNEKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEG FEYTAGTKDYREQLDIGTERDALNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKTFAQALDLPSNA FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGLEAFIDGKWLSIPPLENSVVVNIGEFLELATN GYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFKLNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYH SDLIEKFSFA >Mature_330_residues MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLNEKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEG FEYTAGTKDYREQLDIGTERDALNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKTFAQALDLPSNA FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGLEAFIDGKWLSIPPLENSVVVNIGEFLELATN GYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFKLNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYH SDLIEKFSFA
Specific function: Simultaneously catalyzes two reactions, namely formation of ethylene and of succinate from 2-oxoglutarate [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: NA
Molecular weight: Translated: 37824; Mature: 37824
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLNEKLFKLGKEFFNLSRS CCCCEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCH SKELISMVHSPQFRGYTSEGFEYTAGTKDYREQLDIGTERDALNWNLNSPLWQRLEGPNL HHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC WPSEIPELKKTFLTWHKQTKKACLKLLKTFAQALDLPSNAFDKLYGENSYEHCKIIHYPK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCC SSKNITQGVGSHKDGGLITFVFQEKQSGLEAFIDGKWLSIPPLENSVVVNIGEFLELATN CCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCEEECCCCCCCEEEEHHHHHHHHHC GYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFKLNPELAKESKGVDTDPKNPLLRNV CEEEEEEEEECCCHHHHHEEEEEEEEEECCCCCEEEECHHHHHHCCCCCCCCCCHHHHHH ASNYFKRMIRSHPDVASIYHSDLIEKFSFA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLNEKLFKLGKEFFNLSRS CCCCEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCH SKELISMVHSPQFRGYTSEGFEYTAGTKDYREQLDIGTERDALNWNLNSPLWQRLEGPNL HHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC WPSEIPELKKTFLTWHKQTKKACLKLLKTFAQALDLPSNAFDKLYGENSYEHCKIIHYPK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCC SSKNITQGVGSHKDGGLITFVFQEKQSGLEAFIDGKWLSIPPLENSVVVNIGEFLELATN CCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCEEECCCCCCCEEEEHHHHHHHHHC GYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFKLNPELAKESKGVDTDPKNPLLRNV CEEEEEEEEECCCHHHHHEEEEEEEEEECCCCCEEEECHHHHHHCCCCCCCCCCHHHHHH ASNYFKRMIRSHPDVASIYHSDLIEKFSFA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA