BacMap

Definition	Campylobacter jejuni RM1221, complete genome.
Accession	NC_003912
Length	1,777,831

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The map label for this gene is fabG [H]

Identifier: 57237538

GI number: 57237538

Start: 490489

End: 491277

Strand: Direct

Name: fabG [H]

Synonym: CJE0535

Alternate gene names: 57237538

Gene position: 490489-491277 (Clockwise)

Preceding gene: 57237537

Following gene: 57237539

Centisome position: 27.59

GC content: 32.57

Gene sequence:

>789_bases
ATGGATTTAAAAATTAAAAATAAGGTTTGTATTATTACAGGAGGGGCTAAAGGTATTGGGTATGGTATTGCTAAATTATG
GGCAAGCGAAGGCGGAATTCCTGTAATTTTTTCAAGATCTATGCCTAAAGAGCACGATAAAGAATTAAAAAAATTATCTA
GTGAGTATGAATTTTATGAAATTGATTTAAAAAATTATGAGCAAATTGAAAAGCTTGTAAAAAAAGTTGCTATCAAACAT
GGTGGAATCTATGCTCTTGTAAATAATGCAGGTACAAATGATAATTTACATATTGAAAATACAAGTACTCAAGATTTGAT
AAAATCTTATGAAAATAATCTTTTTCATTATTATGCTATGACCAAAGAATGTTTGCCTTACATTAAAAAAGAACAAGGCA
GTATTTTAAATATAGTGAGTAAAACAGGCATCACAGGACAAGGAAGAACTTCAGCTTATGCTTCGGCCAAAGCGGCTCAA
ATGGGTTTTACTAGAGAATGGGCTTGTGCTTTTGCTAAGGATAATGTTAGGGTAAATGCTATAGCTCCTGCTGAAGTTAT
GACTCCTCTTTATGAAAAATGGCTGCAAAATTTTCCTAATCCTAAAGAGCAATATGAAAAAATCGCAAAAGCTATACCTT
TAGGCCATCGTTTTACTACCATAGAGGAAATTGCAAATACAGCGGTTTTTACACTTAGTCCCCTTGCTTCACATACTACA
GGGCAAATTTTAATGCCAGATGGAGGTTATGTGCATTTAGATAGAGCATTAAATTGGGATGAAAACTAA

Upstream 100 bases:

>100_bases
AGTTGAGTTTGGACTTATAGTGTTAGCATTGATAGCAATTTTAGGTGTATTGGTATTAATACATTTAAAAATAACTTTAA
ATTTAGATAAAGGAGAATAA

Downstream 100 bases:

>100_bases
GGAGTAAAAAATGACTGATTCTAAAAATATAAAAATAGCTATTGTTTTGGTAACTTCTCTTTTCTTTTTATGGGGAGTAA
GCTATGGACTTATTGATGTG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKEHDKELKKLSSEYEFYEIDLKNYEQIEKLVKKVAIKH
GGIYALVNNAGTNDNLHIENTSTQDLIKSYENNLFHYYAMTKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
MGFTREWACAFAKDNVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRFTTIEEIANTAVFTLSPLASHTT
GQILMPDGGYVHLDRALNWDEN

Sequences:

>Translated_262_residues
MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKEHDKELKKLSSEYEFYEIDLKNYEQIEKLVKKVAIKH
GGIYALVNNAGTNDNLHIENTSTQDLIKSYENNLFHYYAMTKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
MGFTREWACAFAKDNVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRFTTIEEIANTAVFTLSPLASHTT
GQILMPDGGYVHLDRALNWDEN
>Mature_262_residues
MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKEHDKELKKLSSEYEFYEIDLKNYEQIEKLVKKVAIKH
GGIYALVNNAGTNDNLHIENTSTQDLIKSYENNLFHYYAMTKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
MGFTREWACAFAKDNVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRFTTIEEIANTAVFTLSPLASHTT
GQILMPDGGYVHLDRALNWDEN

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=30.2040816326531, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI59889578, Length=193, Percent_Identity=33.6787564766839, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI19923817, Length=275, Percent_Identity=29.8181818181818, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=28.6852589641434, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=27.3469387755102, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI66933014, Length=192, Percent_Identity=28.6458333333333, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=26.8421052631579, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=23.5521235521236, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4504503, Length=230, Percent_Identity=25.6521739130435, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=28.2178217821782, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=31.7829457364341, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=29.0836653386454, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=27.9527559055118, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=29.9212598425197, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=29.6442687747036, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=26.3565891472868, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=26.0536398467433, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=24.0816326530612, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=23.6, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790717, Length=264, Percent_Identity=25.3787878787879, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=30.3149606299213, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=28.8617886178862, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=31.3492063492063, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17555706, Length=266, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=30.188679245283, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=26.984126984127, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=29.6577946768061, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=29.6992481203008, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=30.9160305343511, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=27.6515151515151, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=31.0861423220974, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=25.1937984496124, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=26.3736263736264, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=28.4090909090909, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=231, Percent_Identity=29.004329004329, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=28.2442748091603, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=26.8199233716475, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=28.030303030303, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=28.4615384615385, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=234, Percent_Identity=24.7863247863248, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=25.4980079681275, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=28.0769230769231, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=27.4809160305344, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193203115, Length=232, Percent_Identity=24.1379310344828, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=227, Percent_Identity=25.1101321585903, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=262, Percent_Identity=27.8625954198473, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=29.7297297297297, Blast_Score=88, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322227, Length=192, Percent_Identity=26.5625, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=31.6, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=30.8, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=30.0395256916996, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=29.0836653386454, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=26.8292682926829, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 29310; Mature: 29310

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKEHDKELKKLSSEYEFYE
CCCEECCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE
IDLKNYEQIEKLVKKVAIKHGGIYALVNNAGTNDNLHIENTSTQDLIKSYENNLFHYYAM
ECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCEEEEEHH
TKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQMGFTREWACAFAKDNVRVNA
HHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHEEECCCEEEEE
IAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRFTTIEEIANTAVFTLSPLASHTT
ECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCC
GQILMPDGGYVHLDRALNWDEN
CEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKEHDKELKKLSSEYEFYE
CCCEECCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE
IDLKNYEQIEKLVKKVAIKHGGIYALVNNAGTNDNLHIENTSTQDLIKSYENNLFHYYAM
ECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCEEEEEHH
TKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQMGFTREWACAFAKDNVRVNA
HHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHEEECCCEEEEE
IAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRFTTIEEIANTAVFTLSPLASHTT
ECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCC
GQILMPDGGYVHLDRALNWDEN
CEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]