Click here to switch to the map view.

The map label for this gene is rhmT [H]

Identifier: 57237537

GI number: 57237537

Start: 489202

End: 490488

Strand: Direct

Name: rhmT [H]

Synonym: CJE0534

Alternate gene names: 57237537

Gene position: 489202-490488 (Clockwise)

Preceding gene: 57237536

Following gene: 57237538

Centisome position: 27.52

GC content: 29.22

Gene sequence:

>1287_bases
ATGAAACATGCAAATTCAATAAAGTTAGAGTTAGTATGTAAAAAAATATCTTGGCGTATTTTGCCTTTGATTGTTTTGAT
GTTTTGTCTTTCTATGCTTGATAGGACAAATATTAGCTTTGTGAAATCTCATATAGAAATTGATGCAGGCATCGGTGAGG
CTGCTTATGCTTTGGGTGCTGGAATATTTTTTATAGGTTATGCCATTTTTGAAGTGCCTTCAAATTTATTTTTGCATAAA
TTAGGAGCAAAAATTTGGTTGAGCCGTATAATGATCACTTGGGGTCTTGTAACTATGGCAATGATTTTTATACAAGGAGA
AATAAGTTTTTATGTATTAAGATTTTTATTGGGTTTAACTGAAGCAGGTTTTAGTCCAGGCATTATTTTATACCTTAGTT
ATTTTTTCCCAGCTATATATCGATCTAAGGTTTATGGAATTTATCAAATGGGAGTTCCAATTGCTTTTGTTTTTGGTTCT
TTAATTAGCGGTTTTATACTTGATTATACACCAAATATATATTTTAAAAATTGGCAATGGATGTTTTTAATAGAAGGAGG
TATTACCGTTTTAGTAGGTATTTTTTGTTTATTTTATCTTGATTCACATCCAAAAGATGCAAAATGGTTAGATATAAAAG
AAAAAGATATTTTGCTAAAACATATTGAAATTTCCAATACTAAAGCTAAGGATTATTCTATAAAAGATATTTTTAAAAGT
ATTTTGGTGTGGAAATTTGTATTTGTTTATTTTTGTATTCAATTAAGTGTTTATGGAGTGCTTTTTTATTTACCAAGTAA
AATTGCCCAAATATTGCAAATAAATGTAGGTTTTGAAGTTGGACTTTTAAATGCCATACCTTGGATTTTTGTTTTTATCG
CCTTGCCAATATTTACCTCATTGGCTGATAAAAAACATTCTTGGAATTTACATGCGATTTTATTTTTACTGCTAGCAAGT
TTGAGCATGATAGCTTCAACTTTTGTTACAAATTTGGCGGCATTTTTATTTTTTATTAGCTTGGCTGCTATAGGTTTTAT
AGTCATTCAGCCTATATTTTGGAATTTGCCAACTCAAGTTTTAAAAGGAAAAGGAGCCGCGGCTGCTATTGCTCTTATAG
GATCCTTGGGAAATTTAGGAGGTTTTGTAGCTCCTACTTTAAAAACATATATAGAAAATCATTTTGGAGTTGAGTTTGGA
CTTATAGTGTTAGCATTGATAGCAATTTTAGGTGTATTGGTATTAATACATTTAAAAATAACTTTAAATTTAGATAAAGG
AGAATAA

Upstream 100 bases:

>100_bases
TCGTGCGAATTTCAGATGGAGAATTGGTAAAAGCAGAGCTTAACGAGCAAAATGATTTTTCAGTTTGGAGACTTGCTACA
ACTTGTTAAAGGGTAAAGTG

Downstream 100 bases:

>100_bases
ATGGATTTAAAAATTAAAAATAAGGTTTGTATTATTACAGGAGGGGCTAAAGGTATTGGGTATGGTATTGCTAAATTATG
GGCAAGCGAAGGCGGAATTC

Product: tartrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGAGIFFIGYAIFEVPSNLFLHK
LGAKIWLSRIMITWGLVTMAMIFIQGEISFYVLRFLLGLTEAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGS
LISGFILDYTPNIYFKNWQWMFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDILLKHIEISNTKAKDYSIKDIFKS
ILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINVGFEVGLLNAIPWIFVFIALPIFTSLADKKHSWNLHAILFLLLAS
LSMIASTFVTNLAAFLFFISLAAIGFIVIQPIFWNLPTQVLKGKGAAAAIALIGSLGNLGGFVAPTLKTYIENHFGVEFG
LIVLALIAILGVLVLIHLKITLNLDKGE

Sequences:

>Translated_428_residues
MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGAGIFFIGYAIFEVPSNLFLHK
LGAKIWLSRIMITWGLVTMAMIFIQGEISFYVLRFLLGLTEAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGS
LISGFILDYTPNIYFKNWQWMFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDILLKHIEISNTKAKDYSIKDIFKS
ILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINVGFEVGLLNAIPWIFVFIALPIFTSLADKKHSWNLHAILFLLLAS
LSMIASTFVTNLAAFLFFISLAAIGFIVIQPIFWNLPTQVLKGKGAAAAIALIGSLGNLGGFVAPTLKTYIENHFGVEFG
LIVLALIAILGVLVLIHLKITLNLDKGE
>Mature_428_residues
MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGAGIFFIGYAIFEVPSNLFLHK
LGAKIWLSRIMITWGLVTMAMIFIQGEISFYVLRFLLGLTEAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGS
LISGFILDYTPNIYFKNWQWMFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDILLKHIEISNTKAKDYSIKDIFKS
ILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINVGFEVGLLNAIPWIFVFIALPIFTSLADKKHSWNLHAILFLLLAS
LSMIASTFVTNLAAFLFFISLAAIGFIVIQPIFWNLPTQVLKGKGAAAAIALIGSLGNLGGFVAPTLKTYIENHFGVEFG
LIVLALIAILGVLVLIHLKITLNLDKGE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=294, Percent_Identity=25.5102040816327, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI87082071, Length=421, Percent_Identity=36.104513064133, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI87082320, Length=417, Percent_Identity=21.3429256594724, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789152, Length=425, Percent_Identity=23.7647058823529, Blast_Score=62, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=192, Percent_Identity=24.4791666666667, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6321698, Length=264, Percent_Identity=23.8636363636364, Blast_Score=76, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6323032, Length=252, Percent_Identity=26.5873015873016, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322973, Length=218, Percent_Identity=23.8532110091743, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47976; Mature: 47976

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHH
GIFFIGYAIFEVPSNLFLHKLGAKIWLSRIMITWGLVTMAMIFIQGEISFYVLRFLLGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGSLISGFILDYTPNIYFKNWQW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECEEE
MFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDILLKHIEISNTKAKDYSIKDIFKS
EEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHEEEEECCCCCCCCCHHHHHHH
ILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINVGFEVGLLNAIPWIFVFIALPIFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LADKKHSWNLHAILFLLLASLSMIASTFVTNLAAFLFFISLAAIGFIVIQPIFWNLPTQV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKGKGAAAAIALIGSLGNLGGFVAPTLKTYIENHFGVEFGLIVLALIAILGVLVLIHLKI
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHE
TLNLDKGE
EEEECCCC
>Mature Secondary Structure
MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHH
GIFFIGYAIFEVPSNLFLHKLGAKIWLSRIMITWGLVTMAMIFIQGEISFYVLRFLLGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGSLISGFILDYTPNIYFKNWQW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECEEE
MFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDILLKHIEISNTKAKDYSIKDIFKS
EEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHEEEEECCCCCCCCCHHHHHHH
ILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINVGFEVGLLNAIPWIFVFIALPIFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LADKKHSWNLHAILFLLLASLSMIASTFVTNLAAFLFFISLAAIGFIVIQPIFWNLPTQV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKGKGAAAAIALIGSLGNLGGFVAPTLKTYIENHFGVEFGLIVLALIAILGVLVLIHLKI
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHE
TLNLDKGE
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]