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The map label for this gene is dapA [H]

Identifier: 57237536

GI number: 57237536

Start: 486853

End: 487761

Strand: Direct

Name: dapA [H]

Synonym: CJE0532

Alternate gene names: 57237536

Gene position: 486853-487761 (Clockwise)

Preceding gene: 57237533

Following gene: 57237537

Centisome position: 27.38

GC content: 31.68

Gene sequence:

>909_bases
ATGGGAATTTTAAAAGGAACTTTACCGGCTTTACTTACTCCATATAAAGATGATGGAAGTATCAATGAAAAAGAATTTAT
TCGCTATTGTGAATTTGGTATTTCTAAAGGCTTGAACGGATTGTTTTGTAATGGAAGTGCAGGGGATTCTCAAGCTTTGA
GCGTGGAAGAGCAAGTTAAGTTAATGAAACTCACCAAAAAGGCTACAAAAAATAATATACCTATCATCACGGGTATTACC
TCGACAATTTATGAAAACACTTTTATTTTGGCGCAAAAAGCTTATGAATTAGGTCTTGATGCCTTATTACTTGCTATGCC
TTATTATTATAAATTGAGTGAAGATACACTTTTTGAATATGTAAAATATTTAGCTTCTGAAGTGAAACTTCCCTTATATG
TTTATAATATACCTCTTTTTGCACCAGCACTAAGCTTAAAATTTATAGAAAAGGTTTCAAAGCTTGATAATGTTGTGGGT
ATAAAAGATAGTAGCGGAGATGCTTTGCTTTTAAATCATATTTTAGATGTAGTACCTAGTAATTTTGATGTTTTTGTAGG
AAGAGAAGAATTTTATGTAGGTGCATTATTAGCAGGTGCAAAAGGTTCTATGACTAGCATAGGTGGAGTTTTTCCAGAAC
TTATGAGCGAAATTTACAAATCAATCAATGAAAAAAATATAGGCAGAGCTTTGCTAATACAAAAAAGTTTATTAAAGGCC
ATAAGATTTGGTATGAGCATAGCTTTTCCTATGGGTTTTGCTTTGCTTTTAAAGGCCAGAGGATTTGAATTTGTAAATGC
TAGTATTCATCCTTTATCACCTGCTACAAAAGAAGAATTAAACACTCGCTTTGATGAAGCAAAAGAGCTTATTAAAACTA
TAGAAAAAGAAACAGGTATAAAACTATGA

Upstream 100 bases:

>100_bases
AAATACGAATTTTTACCAAGTTAACAGCTTGATTTTTTTACAAATATTTTGTTATATTTTTTGTATATAAATATATTTTT
GTATATACGAAAGGAAAAAA

Downstream 100 bases:

>100_bases
AAGGATATATTATAGTCAATGAAAAAGACAATGTTGCCACAGCTTTGCGTGACTTTAAAAAAGGCGAAAAAGTGGCAAAT
ATTGAGCTTTTAAATGATAT

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MGILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCNGSAGDSQALSVEEQVKLMKLTKKATKNNIPIITGIT
STIYENTFILAQKAYELGLDALLLAMPYYYKLSEDTLFEYVKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVG
IKDSSGDALLLNHILDVVPSNFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEIYKSINEKNIGRALLIQKSLLKA
IRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPATKEELNTRFDEAKELIKTIEKETGIKL

Sequences:

>Translated_302_residues
MGILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCNGSAGDSQALSVEEQVKLMKLTKKATKNNIPIITGIT
STIYENTFILAQKAYELGLDALLLAMPYYYKLSEDTLFEYVKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVG
IKDSSGDALLLNHILDVVPSNFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEIYKSINEKNIGRALLIQKSLLKA
IRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPATKEELNTRFDEAKELIKTIEKETGIKL
>Mature_301_residues
GILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCNGSAGDSQALSVEEQVKLMKLTKKATKNNIPIITGITS
TIYENTFILAQKAYELGLDALLLAMPYYYKLSEDTLFEYVKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVGI
KDSSGDALLLNHILDVVPSNFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEIYKSINEKNIGRALLIQKSLLKAI
RFGMSIAFPMGFALLLKARGFEFVNASIHPLSPATKEELNTRFDEAKELIKTIEKETGIKL

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI13540533, Length=258, Percent_Identity=25.5813953488372, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI87082415, Length=245, Percent_Identity=27.7551020408163, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1789620, Length=298, Percent_Identity=27.1812080536913, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1786463, Length=245, Percent_Identity=26.1224489795918, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1788823, Length=299, Percent_Identity=21.0702341137124, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33337; Mature: 33206

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS00666 DHDPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCNGSAGDSQALSVEEQVK
CCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH
LMKLTKKATKNNIPIITGITSTIYENTFILAQKAYELGLDALLLAMPYYYKLSEDTLFEY
HHHHHHHHHCCCCCEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHH
VKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVGIKDSSGDALLLNHILDVVPS
HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCC
NFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEIYKSINEKNIGRALLIQKSLLKA
CCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPATKEELNTRFDEAKELIKTIEKETGI
HHHCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KL
CC
>Mature Secondary Structure 
GILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCNGSAGDSQALSVEEQVK
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH
LMKLTKKATKNNIPIITGITSTIYENTFILAQKAYELGLDALLLAMPYYYKLSEDTLFEY
HHHHHHHHHCCCCCEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHH
VKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVGIKDSSGDALLLNHILDVVPS
HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCC
NFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEIYKSINEKNIGRALLIQKSLLKA
CCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPATKEELNTRFDEAKELIKTIEKETGI
HHHCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA