| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237364
Identifier: 57237364
GI number: 57237364
Start: 319015
End: 320073
Strand: Direct
Name: 57237364
Synonym: CJE0358
Alternate gene names: NA
Gene position: 319015-320073 (Clockwise)
Preceding gene: 57237363
Following gene: 57237365
Centisome position: 17.94
GC content: 26.91
Gene sequence:
>1059_bases ATGTGGATATTTTTTCGTTTTATTTCAGGGATTTATTTAAAAAATTTTTTTATTATATTTTTTTCTTTGCTTGGTTTTTA TTGCGGTATTGATTTGCTCTTAAATTTTAAAGATCTACCAAAAGCCGCAAATCTTGATTTGCTTTATGTTATGTTTTTAT CTTTCTCGGCAGTGCCTTATGTATTACCCATTTCTTTGATTTTTGCTTTGGTAGTTTCTTTGATTTCTATGATCAGAGCA AATGAATTTGTAAGTCTTTATGCATTAGGACTGAGCAGAAATTATGTTATTTTATTTCCTTTTTTATGGGCTTTATTTTT TTGTTGTATTTATATAGGATTGAATTTTACTTCTTTTGCTTATGCAAATGATTATAAGAGAAATATTTTAAAAAATGGTA CTATTATGAATCAAAGTGGAGAAGTGTTTTTGAAATTTAACAATAATTTTGTTTATATTTCAAAGATAAACAATGGACAA AATAGTGCTCAAAATATAAAAATTTTTAATATCAATGATTTAAATTTAAGCTCTTTTGTAAGTGCTAAAAACGCCTATTT TGAAGGTGAAAGTTGGATTTTGCGAGATGGTAATATTACATTATTACCTAAAAATTATGAACTTGCTAATGATGGTTTAA AGATACAAGATTTCTCCGAGCTTAAATCACTTGAGGGTTTTAAACCAAAGATTATAGAAGGGGTTGCTAGTAATAGTGAT TATTCAATATCTGACGCACTTGAAAGTTTTGAGCTTTTTAAGGCGCAAAATGTCAATACAGATGCTCTTAAAATCAATCT TTATAAATTTGTTTTTACTCCTTTTTTTGCACCATTTTTAATGCTTATTATGTATTATTTTTTTCCTGTAATAGCAAGAT TTTTTAATCTTGCTATTGTAACTTTTATGGCTTTTGTAGTAACTTTGATGATTTGGGGAGTCTTGTTTTTGCTTACTAGA TTAAGCGAAAATAGTGTGATTGCAAGTGAAATTGGCATTGTAGTGCCTATTATAATTTTGGGTTGTTTAAGTGCTTATAT GTATTATAAGCATCGATAA
Upstream 100 bases:
>100_bases TTAAGCAAAGTTTTAGAGCATACAAAAAAAGCTTTGCTTGAGCTTATTGAAAATGATGATTTGTCTGCTATATCATCTAA ATACAGCCTAAAGGCTTAAG
Downstream 100 bases:
>100_bases ATTAAGCTTTGTGTAGTAAAATTATAAAAATTAAAGGTTAAATATGGATTATAAACAATTAAAGCAAGAATTTAATACTC CTTTTTATATTTACAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ Family Protein; Permease; Methionyl-TRNA Formyltransferase; Integral Membrane Protein Permease YjgP/YjgQ; TRNA-I(6)A37 Thiotransferase MiaB; Inner Membrane Protein OxaA; Permease Yjgp/Yjgq Family Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRA NEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ NSAQNIKIFNINDLNLSSFVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASNSD YSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFNLAIVTFMAFVVTLMIWGVLFLLTR LSENSVIASEIGIVVPIIILGCLSAYMYYKHR
Sequences:
>Translated_352_residues MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRA NEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ NSAQNIKIFNINDLNLSSFVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASNSD YSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFNLAIVTFMAFVVTLMIWGVLFLLTR LSENSVIASEIGIVVPIIILGCLSAYMYYKHR >Mature_352_residues MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRA NEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ NSAQNIKIFNINDLNLSSFVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASNSD YSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFNLAIVTFMAFVVTLMIWGVLFLLTR LSENSVIASEIGIVVPIIILGCLSAYMYYKHR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40417; Mature: 40417
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCHH VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTSFA HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHCCCHHHH YANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSSFV HHHHHHHHHHHCCCEECCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHH SAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASNSD HHHCCEECCCEEEEECCCEEEEECCCEECCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCC YSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFNLAIV CCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFMAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKHR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCHH VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTSFA HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHCCCHHHH YANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSSFV HHHHHHHHHHHCCCEECCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHH SAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASNSD HHHCCEECCCEEEEECCCEEEEECCCEECCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCC YSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFNLAIV CCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFMAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKHR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA