Click here to switch to the map view.

The map label for this gene is yjeF [H]

Identifier: 57234780

GI number: 57234780

Start: 399337

End: 400875

Strand: Direct

Name: yjeF [H]

Synonym: DET0427

Alternate gene names: 57234780

Gene position: 399337-400875 (Clockwise)

Preceding gene: 57234781

Following gene: 57234779

Centisome position: 27.17

GC content: 53.54

Gene sequence:

>1539_bases
ATGTATATAGTCTCAACTACCCAGATGCGGCAAATAGAAGAGGCCTGCGTGAAACAGGGTATCACCACCGAAACCCTGAT
GGACAATGCCGGCAGGGCGGTTGCTGTATTGGCCCGCCACCTGCTGGAAAAGCAAAACGGCTGCCGGGTGGTGATACTTG
CGGGTGCGGGCAATAACGGGGGTGACGGGCTGGTTGCCGGGCGTTATCTGGCGGCCTGGGATAAAAAGGTGAGCATATTC
GAACCCTTTGCGGGTGCTTCAAAAAATAAAACTGCTTCGGGTGGTTTAAAAACCCCTGAAAACATATTTACGGATTTAAC
CGGACTTAAGGATCATCTTAGGGAAGCAGATTTGGTAATAGATGCTTTGCTGGGTACAGGCGTAAACCGCCCCTTGGAAG
GGGTGTACAGGCAAGCCCTGCAGATGACGGCTGATGTCAAAAATACCAGACCCGAAATGCAAATACTGGCCTTAGATTTA
TCCTCCGGCCTGAATGCCGATACCGGGCAGGCGGACGAAGCCTGTTTGAAAGCTGATTTTACCCTGTCACTGGGTATTGC
CAAGCAGGGGCTTTTTACCCACCTCGGGCTGGAATTAAGCGGGGCGGTTTCGGTGGCGGATATCGGCATACCGCTGGGAC
TTACAGCTGATATCCATACCCGTCTGATTGAAAAAGACTGGGCAAAGGGTGTTTTGCCTGTCCGTTCCCCTCATGCCAAC
AAGGGCAGTTTCGGCCGGGTGATGATTGTGGCGGGGAGTGACCCTTACATCGGGGCGGCCATGCTTGCCGGAAGTGCCGC
CATGCGTATTGGTGCGGGCTTGGTTACCCTGGCGCTGCCTCAAAGTTTAACCGGGGCGGTAGCCGCCAAAATACCCGAAG
CTACCTATCTGCCGTTGCCCGAAGTATCTTGCGGCACTGCGGATAGCTTTGCTTCACGCCTTATCCTGAGTGAACTGGTC
AAATATGACGTGCTTCTGATAGGGCCGGGCCTGGGGCAAAGTCCATATGCCGCCAGGCTGGTTACCGAAGTGCTGTCTAA
CCTGCCTGAGGAGCTTAAAGTGGTAATAGACGCTGATGCTTTAAATATACTTGCCGCTATACCCCGGTGGTGGCTGGAAT
ATAGTTTTGATGCTATACTCACTCCGCATCCGGGTGAAATGGCCCGCCTAGCCAAAACCACAGCTGAGGCTGTCCAGTCT
GACCGCTTCGGCATTTGCCGTGAATCTGCCCGCAAATGGGGTAAGACCATTATTCTTAAAGGTGCCGGAACAATAGTTTC
ATCACCAGAGGGTGAAACCCTGTGCAACCCGGCGGCTAACCCGGTACTGGCTTCGGCCGGAACGGGTGACGTACTGGCCG
GAATAATAAGCGGTCTTTTGGGGCAGGGTTTGAACCTGTTTGAGGCGGCGGGTTTAGGCGTTTATCTGCACTCGCTAGCT
GGGGCAACTCTGCGGAGTGAAATGGGTGATGCCGGTGTACTGGCTTCGGATCTGCTGTTAAAATTGCCTGCGGTTATAAA
AGAATTGAAACAGAGCTGA

Upstream 100 bases:

>100_bases
ATGCGGGCAGGCTATCAGGGAAGCATGAAAAAGGCCGGGTGTTGATAATAACCCCTCTTGCTGATAAACTCGTCTTAAGC
TTAGCGAAAGCCGGTAATAA

Downstream 100 bases:

>100_bases
GAGATGGATAAACAAATGTCTGAAAAACTGGTGGCGGTAGATATCGGCAATACCAGCGTAAATATAGGTATATTTGAGGG
CGAAAAACTGCTGGCAAACT

Product: carbohydrate kinase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MYIVSTTQMRQIEEACVKQGITTETLMDNAGRAVAVLARHLLEKQNGCRVVILAGAGNNGGDGLVAGRYLAAWDKKVSIF
EPFAGASKNKTASGGLKTPENIFTDLTGLKDHLREADLVIDALLGTGVNRPLEGVYRQALQMTADVKNTRPEMQILALDL
SSGLNADTGQADEACLKADFTLSLGIAKQGLFTHLGLELSGAVSVADIGIPLGLTADIHTRLIEKDWAKGVLPVRSPHAN
KGSFGRVMIVAGSDPYIGAAMLAGSAAMRIGAGLVTLALPQSLTGAVAAKIPEATYLPLPEVSCGTADSFASRLILSELV
KYDVLLIGPGLGQSPYAARLVTEVLSNLPEELKVVIDADALNILAAIPRWWLEYSFDAILTPHPGEMARLAKTTAEAVQS
DRFGICRESARKWGKTIILKGAGTIVSSPEGETLCNPAANPVLASAGTGDVLAGIISGLLGQGLNLFEAAGLGVYLHSLA
GATLRSEMGDAGVLASDLLLKLPAVIKELKQS

Sequences:

>Translated_512_residues
MYIVSTTQMRQIEEACVKQGITTETLMDNAGRAVAVLARHLLEKQNGCRVVILAGAGNNGGDGLVAGRYLAAWDKKVSIF
EPFAGASKNKTASGGLKTPENIFTDLTGLKDHLREADLVIDALLGTGVNRPLEGVYRQALQMTADVKNTRPEMQILALDL
SSGLNADTGQADEACLKADFTLSLGIAKQGLFTHLGLELSGAVSVADIGIPLGLTADIHTRLIEKDWAKGVLPVRSPHAN
KGSFGRVMIVAGSDPYIGAAMLAGSAAMRIGAGLVTLALPQSLTGAVAAKIPEATYLPLPEVSCGTADSFASRLILSELV
KYDVLLIGPGLGQSPYAARLVTEVLSNLPEELKVVIDADALNILAAIPRWWLEYSFDAILTPHPGEMARLAKTTAEAVQS
DRFGICRESARKWGKTIILKGAGTIVSSPEGETLCNPAANPVLASAGTGDVLAGIISGLLGQGLNLFEAAGLGVYLHSLA
GATLRSEMGDAGVLASDLLLKLPAVIKELKQS
>Mature_512_residues
MYIVSTTQMRQIEEACVKQGITTETLMDNAGRAVAVLARHLLEKQNGCRVVILAGAGNNGGDGLVAGRYLAAWDKKVSIF
EPFAGASKNKTASGGLKTPENIFTDLTGLKDHLREADLVIDALLGTGVNRPLEGVYRQALQMTADVKNTRPEMQILALDL
SSGLNADTGQADEACLKADFTLSLGIAKQGLFTHLGLELSGAVSVADIGIPLGLTADIHTRLIEKDWAKGVLPVRSPHAN
KGSFGRVMIVAGSDPYIGAAMLAGSAAMRIGAGLVTLALPQSLTGAVAAKIPEATYLPLPEVSCGTADSFASRLILSELV
KYDVLLIGPGLGQSPYAARLVTEVLSNLPEELKVVIDADALNILAAIPRWWLEYSFDAILTPHPGEMARLAKTTAEAVQS
DRFGICRESARKWGKTIILKGAGTIVSSPEGETLCNPAANPVLASAGTGDVLAGIISGLLGQGLNLFEAAGLGVYLHSLA
GATLRSEMGDAGVLASDLLLKLPAVIKELKQS

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=509, Percent_Identity=32.0235756385069, Blast_Score=192, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17554656, Length=232, Percent_Identity=29.7413793103448, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 53517; Mature: 53517

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVSTTQMRQIEEACVKQGITTETLMDNAGRAVAVLARHLLEKQNGCRVVILAGAGNNG
CEEECHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
GDGLVAGRYLAAWDKKVSIFEPFAGASKNKTASGGLKTPENIFTDLTGLKDHLREADLVI
CCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DALLGTGVNRPLEGVYRQALQMTADVKNTRPEMQILALDLSSGLNADTGQADEACLKADF
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCC
TLSLGIAKQGLFTHLGLELSGAVSVADIGIPLGLTADIHTRLIEKDWAKGVLPVRSPHAN
EEEECHHHHHHHHHCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
KGSFGRVMIVAGSDPYIGAAMLAGSAAMRIGAGLVTLALPQSLTGAVAAKIPEATYLPLP
CCCCCEEEEEECCCCCHHHHHHHCHHHHHHCCCHHEECCCHHHHHHHHHHCCCCCCCCCC
EVSCGTADSFASRLILSELVKYDVLLIGPGLGQSPYAARLVTEVLSNLPEELKVVIDADA
CCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHH
LNILAAIPRWWLEYSFDAILTPHPGEMARLAKTTAEAVQSDRFGICRESARKWGKTIILK
HHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
GAGTIVSSPEGETLCNPAANPVLASAGTGDVLAGIISGLLGQGLNLFEAAGLGVYLHSLA
ECCCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH
GATLRSEMGDAGVLASDLLLKLPAVIKELKQS
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYIVSTTQMRQIEEACVKQGITTETLMDNAGRAVAVLARHLLEKQNGCRVVILAGAGNNG
CEEECHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
GDGLVAGRYLAAWDKKVSIFEPFAGASKNKTASGGLKTPENIFTDLTGLKDHLREADLVI
CCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DALLGTGVNRPLEGVYRQALQMTADVKNTRPEMQILALDLSSGLNADTGQADEACLKADF
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCC
TLSLGIAKQGLFTHLGLELSGAVSVADIGIPLGLTADIHTRLIEKDWAKGVLPVRSPHAN
EEEECHHHHHHHHHCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
KGSFGRVMIVAGSDPYIGAAMLAGSAAMRIGAGLVTLALPQSLTGAVAAKIPEATYLPLP
CCCCCEEEEEECCCCCHHHHHHHCHHHHHHCCCHHEECCCHHHHHHHHHHCCCCCCCCCC
EVSCGTADSFASRLILSELVKYDVLLIGPGLGQSPYAARLVTEVLSNLPEELKVVIDADA
CCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHH
LNILAAIPRWWLEYSFDAILTPHPGEMARLAKTTAEAVQSDRFGICRESARKWGKTIILK
HHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
GAGTIVSSPEGETLCNPAANPVLASAGTGDVLAGIISGLLGQGLNLFEAAGLGVYLHSLA
ECCCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH
GATLRSEMGDAGVLASDLLLKLPAVIKELKQS
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]