| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234781
Identifier: 57234781
GI number: 57234781
Start: 398414
End: 399190
Strand: Direct
Name: 57234781
Synonym: DET0426
Alternate gene names: NA
Gene position: 398414-399190 (Clockwise)
Preceding gene: 57234782
Following gene: 57234780
Centisome position: 27.11
GC content: 51.87
Gene sequence:
>777_bases GTGGAGATAGTATTTTTAGGCGCTCACAACTGCGAAACTAAAACCACCCGTCCCAGCTGCCTGATGCTCTCCGGCGGGGT GGTGCTGGATGCCGGGGCTATTACCTCAAGCCTGACTCTGGACGAGCTTTATGAGCTTAGGGCGGTTATACTGAGCCATG CCCATTATGACCATATAAAAGACGTACCGCTGCTGGCTATGAACCTGGCTTACGGGCTGAAAAGCGTGGATATATACGGA AGCCAAGCAGTTCAGGAAGTAGTTACCCAGCCGCCTTTTTCCGGCGGTTTCTACCCCGATTTTTTCACCCGCCCCCCATC TGCCCCGGCCTTGCGCTTTCATGAAATAACCCCCGGTCTGGAATTTAGCTGTGAAAACTACCAGATACTGCCTTTGTCTG TACCCCATTCCAGAGATACCACCGGGTTTCTGGTAAAAGATGCAGGCGGCCATTCGTTTTTTTATACCTCGGATACCGGC TCAGGCCTGGGGGATGTCTGGCAGCAGATTAATCCGGAGCTGCTGATTATTGAGCTGACCATGCCGAACAGGCTTACTGA GCTGGCTTTAAGTTCCAAGCACCTTTCGTCTGAACTGTTGGAGGCAGAGCTTAGGCTCTTTCGGGAGCTAAAAGGCTATC TGCCCAGGATAGTCACCCTGCATACCACACCCTTGTTTGAGGCTGAAATCAAAACCGAGATACAGGCAGTGGCTGAAAGA CTGCATACCGATATACTTATGGCCAGTGAGGGGCTTAAACTCCGGCTGGGAGAGTAA
Upstream 100 bases:
>100_bases AGCTGGTGAATTATCTGAAAAAAGCTGAAAAAAGTGACTACTTTGATACATCTACCAATTTCAGCCCTTTCCGGCTCTAG ATAATGTTTAAGGGGTAAAG
Downstream 100 bases:
>100_bases GGTACTTTGGCTGCCTCTGAGCTGCCGGGTTTTCCGGCGGGCCAGAATGCGGGCAGGCTATCAGGGAAGCATGAAAAAGG CCGGGTGTTGATAATAACCC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Cyclic-AMP Phosphodiesterase; Beta-Lactamase Domain-Containing Protein; CAMP Phosphodiesterase Class-II; Beta-Lactamase-Like; Camp Phosphodiesterases Class-Ii; 3 5'-Cyclic-Nucleotide Phosphodiesterase; Metallo-Beta-Lactamase; Beta-Lactamase-Like Protein; CAMP Phosphodiesterases Class-II; Metal Dependent Phosphohydrolase; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Metal-Dependent Hydrolase; CAMP Phosphodiesterase
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MEIVFLGAHNCETKTTRPSCLMLSGGVVLDAGAITSSLTLDELYELRAVILSHAHYDHIKDVPLLAMNLAYGLKSVDIYG SQAVQEVVTQPPFSGGFYPDFFTRPPSAPALRFHEITPGLEFSCENYQILPLSVPHSRDTTGFLVKDAGGHSFFYTSDTG SGLGDVWQQINPELLIIELTMPNRLTELALSSKHLSSELLEAELRLFRELKGYLPRIVTLHTTPLFEAEIKTEIQAVAER LHTDILMASEGLKLRLGE
Sequences:
>Translated_258_residues MEIVFLGAHNCETKTTRPSCLMLSGGVVLDAGAITSSLTLDELYELRAVILSHAHYDHIKDVPLLAMNLAYGLKSVDIYG SQAVQEVVTQPPFSGGFYPDFFTRPPSAPALRFHEITPGLEFSCENYQILPLSVPHSRDTTGFLVKDAGGHSFFYTSDTG SGLGDVWQQINPELLIIELTMPNRLTELALSSKHLSSELLEAELRLFRELKGYLPRIVTLHTTPLFEAEIKTEIQAVAER LHTDILMASEGLKLRLGE >Mature_258_residues MEIVFLGAHNCETKTTRPSCLMLSGGVVLDAGAITSSLTLDELYELRAVILSHAHYDHIKDVPLLAMNLAYGLKSVDIYG SQAVQEVVTQPPFSGGFYPDFFTRPPSAPALRFHEITPGLEFSCENYQILPLSVPHSRDTTGFLVKDAGGHSFFYTSDTG SGLGDVWQQINPELLIIELTMPNRLTELALSSKHLSSELLEAELRLFRELKGYLPRIVTLHTTPLFEAEIKTEIQAVAER LHTDILMASEGLKLRLGE
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28541; Mature: 28541
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIVFLGAHNCETKTTRPSCLMLSGGVVLDAGAITSSLTLDELYELRAVILSHAHYDHIK CEEEEEECCCCCCCCCCCCEEEEECCEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHC DVPLLAMNLAYGLKSVDIYGSQAVQEVVTQPPFSGGFYPDFFTRPPSAPALRFHEITPGL CCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC EFSCENYQILPLSVPHSRDTTGFLVKDAGGHSFFYTSDTGSGLGDVWQQINPELLIIELT EECCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEE MPNRLTELALSSKHLSSELLEAELRLFRELKGYLPRIVTLHTTPLFEAEIKTEIQAVAER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH LHTDILMASEGLKLRLGE HHHHHEEECCCCEEEECC >Mature Secondary Structure MEIVFLGAHNCETKTTRPSCLMLSGGVVLDAGAITSSLTLDELYELRAVILSHAHYDHIK CEEEEEECCCCCCCCCCCCEEEEECCEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHC DVPLLAMNLAYGLKSVDIYGSQAVQEVVTQPPFSGGFYPDFFTRPPSAPALRFHEITPGL CCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC EFSCENYQILPLSVPHSRDTTGFLVKDAGGHSFFYTSDTGSGLGDVWQQINPELLIIELT EECCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEE MPNRLTELALSSKHLSSELLEAELRLFRELKGYLPRIVTLHTTPLFEAEIKTEIQAVAER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH LHTDILMASEGLKLRLGE HHHHHEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA