| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is coaX [H]
Identifier: 57234779
GI number: 57234779
Start: 400891
End: 401667
Strand: Direct
Name: coaX [H]
Synonym: DET0428
Alternate gene names: 57234779
Gene position: 400891-401667 (Clockwise)
Preceding gene: 57234780
Following gene: 57234778
Centisome position: 27.28
GC content: 51.35
Gene sequence:
>777_bases ATGTCTGAAAAACTGGTGGCGGTAGATATCGGCAATACCAGCGTAAATATAGGTATATTTGAGGGCGAAAAACTGCTGGC AAACTGGCATCTGGGTTCGGTTGCCCAGCGTATGGCTGATGAATATGCCAGTCTGCTCTTAGGCCTGTTGCAGCACGCCG GTATACACCCGGAAGAGCTAAACAGGGTAATCATGTGCAGTGTTGTGCCGCCCCTGACCACTACTTTTGAAGAGGTATTT AAAAGCTATTTCAAGGCTGCTCCTCTGGTAGTGGGTGCAGGTATAAAGAGCGGGGTTAAGGTGCGCATGGATAACCCCCG TGAGGTTGGGGCTGACCGCATAGTAAATGCCGCTGCCGCCAGGGTGCTTTATCCGGGGGCGTGCATAATAGTGGACATGG GTACGGCCACTACCTTTGATACCCTTTCCGAGGGTGGGGCATATATAGGCGGGGCGATTGCACCCGGTATTGCCACCTCA GCCCAGGCTATTGCGGAAAAGACTTCAAAACTGCCCAAGATTGAGATAATCCGTCCTGCCAAAGTTATCGGCTCTAATAC TGTGTCGGCTATGCAGTCAGGTATATACTTCGGTTATATCGGGCTGGTGGAAGAGCTGGTCAGGCGGATTCAAACTGAAT TGGGGCAGAAAACCAGAGTTGTGGCTACCGGCGGTTATGCCGCGCTTATAGCCGAAGGCAGCCGTATTTTTGATATTGTC CGCCCTGACCTTACCCTTCAGGGACTCAGGATTATTTACCAGATGAATCAGGCTTAG
Upstream 100 bases:
>100_bases GAGTGAAATGGGTGATGCCGGTGTACTGGCTTCGGATCTGCTGTTAAAATTGCCTGCGGTTATAAAAGAATTGAAACAGA GCTGAGAGATGGATAAACAA
Downstream 100 bases:
>100_bases TTATCGGTGTATATTAAAAGCAGGAATGTAGGCTGCGGTAAGAGCCTTACTGCTTAAGGGATACTAGCTGAAAAGACTTG CCGGGGGGAGTGCAGACGGA
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSEKLVAVDIGNTSVNIGIFEGEKLLANWHLGSVAQRMADEYASLLLGLLQHAGIHPEELNRVIMCSVVPPLTTTFEEVF KSYFKAAPLVVGAGIKSGVKVRMDNPREVGADRIVNAAAARVLYPGACIIVDMGTATTFDTLSEGGAYIGGAIAPGIATS AQAIAEKTSKLPKIEIIRPAKVIGSNTVSAMQSGIYFGYIGLVEELVRRIQTELGQKTRVVATGGYAALIAEGSRIFDIV RPDLTLQGLRIIYQMNQA
Sequences:
>Translated_258_residues MSEKLVAVDIGNTSVNIGIFEGEKLLANWHLGSVAQRMADEYASLLLGLLQHAGIHPEELNRVIMCSVVPPLTTTFEEVF KSYFKAAPLVVGAGIKSGVKVRMDNPREVGADRIVNAAAARVLYPGACIIVDMGTATTFDTLSEGGAYIGGAIAPGIATS AQAIAEKTSKLPKIEIIRPAKVIGSNTVSAMQSGIYFGYIGLVEELVRRIQTELGQKTRVVATGGYAALIAEGSRIFDIV RPDLTLQGLRIIYQMNQA >Mature_257_residues SEKLVAVDIGNTSVNIGIFEGEKLLANWHLGSVAQRMADEYASLLLGLLQHAGIHPEELNRVIMCSVVPPLTTTFEEVFK SYFKAAPLVVGAGIKSGVKVRMDNPREVGADRIVNAAAARVLYPGACIIVDMGTATTFDTLSEGGAYIGGAIAPGIATSA QAIAEKTSKLPKIEIIRPAKVIGSNTVSAMQSGIYFGYIGLVEELVRRIQTELGQKTRVVATGGYAALIAEGSRIFDIVR PDLTLQGLRIIYQMNQA
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 27490; Mature: 27359
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLVAVDIGNTSVNIGIFEGEKLLANWHLGSVAQRMADEYASLLLGLLQHAGIHPEEL CCCCEEEEEECCCEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC NRVIMCSVVPPLTTTFEEVFKSYFKAAPLVVGAGIKSGVKVRMDNPREVGADRIVNAAAA CEEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHH RVLYPGACIIVDMGTATTFDTLSEGGAYIGGAIAPGIATSAQAIAEKTSKLPKIEIIRPA HHCCCCEEEEEECCCCCCHHHHHCCCCEECCHHCCCHHHHHHHHHHHHHCCCCEEEECCH KVIGSNTVSAMQSGIYFGYIGLVEELVRRIQTELGQKTRVVATGGYAALIAEGSRIFDIV HHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCEEEEC RPDLTLQGLRIIYQMNQA CCCCHHHHHHHEEEECCC >Mature Secondary Structure SEKLVAVDIGNTSVNIGIFEGEKLLANWHLGSVAQRMADEYASLLLGLLQHAGIHPEEL CCCEEEEEECCCEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC NRVIMCSVVPPLTTTFEEVFKSYFKAAPLVVGAGIKSGVKVRMDNPREVGADRIVNAAAA CEEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHH RVLYPGACIIVDMGTATTFDTLSEGGAYIGGAIAPGIATSAQAIAEKTSKLPKIEIIRPA HHCCCCEEEEEECCCCCCHHHHHCCCCEECCHHCCCHHHHHHHHHHHHHCCCCEEEECCH KVIGSNTVSAMQSGIYFGYIGLVEELVRRIQTELGQKTRVVATGGYAALIAEGSRIFDIV HHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCEEEEC RPDLTLQGLRIIYQMNQA CCCCHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA