| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234427
Identifier: 57234427
GI number: 57234427
Start: 714569
End: 716098
Strand: Direct
Name: 57234427
Synonym: DET0777
Alternate gene names: NA
Gene position: 714569-716098 (Clockwise)
Preceding gene: 57234428
Following gene: 57234426
Centisome position: 48.62
GC content: 51.57
Gene sequence:
>1530_bases ATGCCTGAACTGTTGACTGATGACCTCAATGCCCTGCTGGAGGTACTTCCCCCTCATGTCCGCCAGCCGTTTGCAAACCC TGCTGACCGGGAAAATCTGATAGAAATTGTTATGGATTTGGGGCGTACTCCCGAAGCCCGTTTTCCTGACCGTGAGATTA TCCTGTCTGAACGTGATGTTACCCAGGAAGATATTGATTATGTATCCTCCCGCATAGGTGATTTCGGTGATGACAACCGG GCAGGTATTGAACGTACTTTGCACCGTATTTCCGCTATACGCAACCGCAAAGGCAAAATAGTAGGTTTGACCCTTCGGGT AGGACGGGCGGTTTTCGGCACTATCAAAATCATTCAGGACCTTATCCAGTCAGGACAGAGCGTGCTTATGCTGGGCCGCC CTGGTGTGGGCAAGACCACTATGCTCAGGGAAGTAGCCAGAGTGCTGGCGGGTGACCTTAAAAAACGGGTGGTTATAGTG GACACTTCCAATGAAATTGCAGGTGACGGGGATATCCCCCACCCTGCCATTGGCCATGCTCGCCGCATGCAGGTCCGTAC GCCTGATATGCAGCACGCCGTTATGATAGAGGCAGTTGAAAACCATATGCCGCAGGTGATTGTAATAGATGAAATAGGCA CGGAACTGGAAGCCCTGGCTGCCCGCACCATCGCTGAACGGGGTGTTCAGCTGGTAGGCACAGCTCATGGCAATGTGCTG GATAACCTGATGCTTAACCCTACCTTAAGTGACCTTATCGGCGGTATCCAGTCTGTTACCCTGGGTGACGAAGAAGCCCG CAGACGCGGAACCCAGAAAACTATACTGGAACGGCGCGCCCCGCCCACTTTTCAGGTGATTGTGGAAATACAGGAACGCA ACAAAGTGGCTGTCCACCCGGATGTGGGTGCGGCGGTAGACTCTATTTTACGGGGGGTGTCCCCTTCGTCTGAAATCCGC TACCTTGATGAAAATGGCGAGGTAGTTATCAGCAAGCAGCAGCCCAGCGAAGAAAAAGTTAAAGTTGCCGCCGAGAGTTT GCCTCTTCCAAAGGGCAAGGAACTGCCGGTTATGTATCTTTTCGGGGTGAACCGCAGCCGTATGGAAGAAATTGCCCGGG AAATGCATCTGGATATCAAGCTGGCCGAACGCCCTGAGCAGGCACAGCTGATGGTTACTTCGCGGAATTATTACCGCCGC AAACCCCAAAGGGTGCGTGATGCCGAAAATATGAATATACCTATATACGTACTTAAGAGCCATACGCCGGGGCAGTTCCA CCAGCTTCTGGCTACCCTTAGCGGCAGGGATGTAGCTTTTACAGCAGATAAGCCGCCTGAAATAGATTTAGCTATACATG AAGCCGAAGAAGCAATAGCCCAGGTTAAAAGTTCCCATATACCGGTAGAGCTTAGCCCGCAGGGTGCTTATATAAGGCGC TTTCAGCACATAATAGCTGAAAAAGAGCATCTTTCTTCCCATAGTTTGGGCAAAGAGCCGCACCGCCGGGTAAGAATATC AAGGGGTTAA
Upstream 100 bases:
>100_bases ATCCGCTAAATCCGGGTGAGGCCTTGTAAGGAGTGGAAGCAGATTAAGCCCTGTATACTTATCTGCAGTACTGGTTGCCA AAAAGATTACGGAGGCAGAT
Downstream 100 bases:
>100_bases AATATGTCTTTGTTTATAACATTTGAGGGCGGCGAAGGCTGCGGCAAAAGCACCCAGTCCAAGGCATTGTACAGGTATCT GAAAAAACTGGGGCTGGGGT
Product: R3H domain-containing protein
Products: NA
Alternate protein names: AAA ATPase; R3H Domain Protein; ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; Stage III Sporulation Protein IIIAA; ATPase Like Protein
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MPELLTDDLNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDYVSSRIGDFGDDNR AGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIV DTSNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVL DNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAVDSILRGVSPSSEIR YLDENGEVVISKQQPSEEKVKVAAESLPLPKGKELPVMYLFGVNRSRMEEIAREMHLDIKLAERPEQAQLMVTSRNYYRR KPQRVRDAENMNIPIYVLKSHTPGQFHQLLATLSGRDVAFTADKPPEIDLAIHEAEEAIAQVKSSHIPVELSPQGAYIRR FQHIIAEKEHLSSHSLGKEPHRRVRISRG
Sequences:
>Translated_509_residues MPELLTDDLNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDYVSSRIGDFGDDNR AGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIV DTSNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVL DNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAVDSILRGVSPSSEIR YLDENGEVVISKQQPSEEKVKVAAESLPLPKGKELPVMYLFGVNRSRMEEIAREMHLDIKLAERPEQAQLMVTSRNYYRR KPQRVRDAENMNIPIYVLKSHTPGQFHQLLATLSGRDVAFTADKPPEIDLAIHEAEEAIAQVKSSHIPVELSPQGAYIRR FQHIIAEKEHLSSHSLGKEPHRRVRISRG >Mature_508_residues PELLTDDLNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDYVSSRIGDFGDDNRA GIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVD TSNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLD NLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAVDSILRGVSPSSEIRY LDENGEVVISKQQPSEEKVKVAAESLPLPKGKELPVMYLFGVNRSRMEEIAREMHLDIKLAERPEQAQLMVTSRNYYRRK PQRVRDAENMNIPIYVLKSHTPGQFHQLLATLSGRDVAFTADKPPEIDLAIHEAEEAIAQVKSSHIPVELSPQGAYIRRF QHIIAEKEHLSSHSLGKEPHRRVRISRG
Specific function: Unknown
COG id: COG3854
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56741; Mature: 56610
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS51061 R3H
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELLTDDLNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDREIILSERDV CCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHEEECCCCC TQEDIDYVSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQD CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHH LIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHA HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCC RRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVL CEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHH DNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHP HHHHCCCCHHHHHCCHHEECCCCHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCEEEECC DVGAAVDSILRGVSPSSEIRYLDENGEVVISKQQPSEEKVKVAAESLPLPKGKELPVMYL CHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE FGVNRSRMEEIAREMHLDIKLAERPEQAQLMVTSRNYYRRKPQRVRDAENMNIPIYVLKS ECCCHHHHHHHHHHHCCCEEECCCCCCCEEEEECCHHHHCCCHHHHCCCCCCCEEEEEEC HTPGQFHQLLATLSGRDVAFTADKPPEIDLAIHEAEEAIAQVKSSHIPVELSPQGAYIRR CCCHHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCCCHHHHH FQHIIAEKEHLSSHSLGKEPHRRVRISRG HHHHHHHHHHHHHCCCCCCCHHCEEECCC >Mature Secondary Structure PELLTDDLNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDREIILSERDV CCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHEEECCCCC TQEDIDYVSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQD CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHH LIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHA HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCC RRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVL CEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHH DNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHP HHHHCCCCHHHHHCCHHEECCCCHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCEEEECC DVGAAVDSILRGVSPSSEIRYLDENGEVVISKQQPSEEKVKVAAESLPLPKGKELPVMYL CHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE FGVNRSRMEEIAREMHLDIKLAERPEQAQLMVTSRNYYRRKPQRVRDAENMNIPIYVLKS ECCCHHHHHHHHHHHCCCEEECCCCCCCEEEEECCHHHHCCCHHHHCCCCCCCEEEEEEC HTPGQFHQLLATLSGRDVAFTADKPPEIDLAIHEAEEAIAQVKSSHIPVELSPQGAYIRR CCCHHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCCCHHHHH FQHIIAEKEHLSSHSLGKEPHRRVRISRG HHHHHHHHHHHHHCCCCCCCHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA