| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is bfr [H]
Identifier: 57234241
GI number: 57234241
Start: 876070
End: 876897
Strand: Direct
Name: bfr [H]
Synonym: DET0955
Alternate gene names: 57234241
Gene position: 876070-876897 (Clockwise)
Preceding gene: 57234242
Following gene: 57234240
Centisome position: 59.61
GC content: 46.14
Gene sequence:
>828_bases ATGGATAGACCCAAGATTATTGAGCTGCTTAATAGAGATATGGAAGATGAACACGGAGCTATTATCCAGTATCTGGGTCA TGCCTACGCTATAGGTGAAGGAGAGACAGCCTGCGAGATAGAAGCTATTGCCCGTGAAGAAATGCGCCATCTGGATTGGC TGGCAGAGGCCATTACAGATTTGGGCGGAGAACCCAGCTTCAAACGGGGCATGATGGATATGACCGGCCAAACTGTATCC GAATGGATGCAGGCCAATATAGGGCTGGAGAACGGTGCTATCGCTCAGTACCGTGAACATATAAGGCTGATTGACGACCC TAAAATAAAGCGTTTGCTTATGCGTATCCTTTCGGACGAGGAATCCCATCAGAGGGACTTTAAACACTTTGCCGAGAAGA CACTACGGGAAAAGATGGCCGACAAGCGCGGGAATGCCACCGGTACTACTGCTGAAAACCTGAGCTGGGGCATAAAACAT GAATACACAGTTATCCTTCAGTATCTGCTCCAGTCTTATGCCGCCAAAAATGAGGAAACCCGGAAAGAGCTCCAGGACCA GGCCATAAACGAAATGCAGCACATGGGCTGGCTTGCAGAAAAAATGATAGACAAAAAAGGTTTTCCGCATCTGGAACATG GTAAAATTGAACAAACCCTTGAACACAACAAGATGCTCAAGGCAGATATAGAACTGGAACACAAGGTGGCTGACAAATAC GACCAATCCGCTATCCAGTCAACCGAAAGTGACGTAAAAGAATTATTCAAAAAACTTTCAGCCCATGAACGCTACCATGC CGAAGTATTTAAAGACCTGTTAGAATAA
Upstream 100 bases:
>100_bases AGCCAACATAAATACCAAACCAGGCAATCCAAAAACCAAATCCTGACCATACTTAGATAGACTGCCCGCTCTGAATAATA CCGCTAAGAAAGGACTCCGG
Downstream 100 bases:
>100_bases AATATATTATTATTGCGGAGGGATTTGTTATGTATACAGCTCATGATTATTCAGCCCTATTAGGACTTGAGGGATTCTCC GACACGCTACTCAAAAATCA
Product: bacterioferritin domain-containing protein
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDRPKIIELLNRDMEDEHGAIIQYLGHAYAIGEGETACEIEAIAREEMRHLDWLAEAITDLGGEPSFKRGMMDMTGQTVS EWMQANIGLENGAIAQYREHIRLIDDPKIKRLLMRILSDEESHQRDFKHFAEKTLREKMADKRGNATGTTAENLSWGIKH EYTVILQYLLQSYAAKNEETRKELQDQAINEMQHMGWLAEKMIDKKGFPHLEHGKIEQTLEHNKMLKADIELEHKVADKY DQSAIQSTESDVKELFKKLSAHERYHAEVFKDLLE
Sequences:
>Translated_275_residues MDRPKIIELLNRDMEDEHGAIIQYLGHAYAIGEGETACEIEAIAREEMRHLDWLAEAITDLGGEPSFKRGMMDMTGQTVS EWMQANIGLENGAIAQYREHIRLIDDPKIKRLLMRILSDEESHQRDFKHFAEKTLREKMADKRGNATGTTAENLSWGIKH EYTVILQYLLQSYAAKNEETRKELQDQAINEMQHMGWLAEKMIDKKGFPHLEHGKIEQTLEHNKMLKADIELEHKVADKY DQSAIQSTESDVKELFKKLSAHERYHAEVFKDLLE >Mature_275_residues MDRPKIIELLNRDMEDEHGAIIQYLGHAYAIGEGETACEIEAIAREEMRHLDWLAEAITDLGGEPSFKRGMMDMTGQTVS EWMQANIGLENGAIAQYREHIRLIDDPKIKRLLMRILSDEESHQRDFKHFAEKTLREKMADKRGNATGTTAENLSWGIKH EYTVILQYLLQSYAAKNEETRKELQDQAINEMQHMGWLAEKMIDKKGFPHLEHGKIEQTLEHNKMLKADIELEHKVADKY DQSAIQSTESDVKELFKKLSAHERYHAEVFKDLLE
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 31890; Mature: 31890
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPKIIELLNRDMEDEHGAIIQYLGHAYAIGEGETACEIEAIAREEMRHLDWLAEAITD CCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGGEPSFKRGMMDMTGQTVSEWMQANIGLENGAIAQYREHIRLIDDPKIKRLLMRILSDE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC ESHQRDFKHFAEKTLREKMADKRGNATGTTAENLSWGIKHEYTVILQYLLQSYAAKNEET HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH RKELQDQAINEMQHMGWLAEKMIDKKGFPHLEHGKIEQTLEHNKMLKADIELEHKVADKY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DQSAIQSTESDVKELFKKLSAHERYHAEVFKDLLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDRPKIIELLNRDMEDEHGAIIQYLGHAYAIGEGETACEIEAIAREEMRHLDWLAEAITD CCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGGEPSFKRGMMDMTGQTVSEWMQANIGLENGAIAQYREHIRLIDDPKIKRLLMRILSDE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC ESHQRDFKHFAEKTLREKMADKRGNATGTTAENLSWGIKHEYTVILQYLLQSYAAKNEET HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH RKELQDQAINEMQHMGWLAEKMIDKKGFPHLEHGKIEQTLEHNKMLKADIELEHKVADKY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DQSAIQSTESDVKELFKKLSAHERYHAEVFKDLLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11454214; 10841764; 11034331; 11173495; 12627224 [H]