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The map label for this gene is (hspc4-1 [H]

Identifier: 57234242

GI number: 57234242

Start: 875527

End: 876015

Strand: Direct

Name: (hspc4-1 [H]

Synonym: DET0954

Alternate gene names: 57234242

Gene position: 875527-876015 (Clockwise)

Preceding gene: 57234243

Following gene: 57234241

Centisome position: 59.57

GC content: 46.63

Gene sequence:

>489_bases
ATGACTCTGGAAAGATGGCAACCGGGTTGGTCACTGCGTCCCTGGCGTCCTTTCCGAGAAATACTCAGTCCCGGCCTTTG
GAGTATGCTAGCTAACGAACGTGACTGGCTGCCGGCTACCGAAATGCTGGAGCTTAAGGACAAATATCTGATAAAGGCAG
AGATGCCCGGCATAAATGAAGAGGATATTGAAGTTTCGGTATCAGATAACGTACTTACCATCAAAGGCGAAAAAAAGTAC
ACCAGCGAAGTATCTGAGGAAAATTATTACTTCAGTGAAAGAAGTTACGGCAGTTTCTCACGCTCTATGACCCTGCCCAA
CAATACCAGCATCCAGAATATTGCAGCCACGCTGGATAACGGCATCTTGGAAATCAGCATACCCAAGGTATCCGAAGCTA
AGGCTAAGAAGGTTTCGGTGACCAAGGCCGCCAAAACCAGAAAAGCCAACATAAATACCAAACCAGGCAATCCAAAAACC
AAATCCTGA

Upstream 100 bases:

>100_bases
AATAACACACCCGTTATAAGTATTGATACGTATTGAGACATTTTTACCGGCATGGCATACTTTTATATAAGGAGAGAGCG
GGCGAAAAGGAGGTTTGATT

Downstream 100 bases:

>100_bases
CCATACTTAGATAGACTGCCCGCTCTGAATAATACCGCTAAGAAAGGACTCCGGATGGATAGACCCAAGATTATTGAGCT
GCTTAATAGAGATATGGAAG

Product: Hsp20/alpha crystallin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTLERWQPGWSLRPWRPFREILSPGLWSMLANERDWLPATEMLELKDKYLIKAEMPGINEEDIEVSVSDNVLTIKGEKKY
TSEVSEENYYFSERSYGSFSRSMTLPNNTSIQNIAATLDNGILEISIPKVSEAKAKKVSVTKAAKTRKANINTKPGNPKT
KS

Sequences:

>Translated_162_residues
MTLERWQPGWSLRPWRPFREILSPGLWSMLANERDWLPATEMLELKDKYLIKAEMPGINEEDIEVSVSDNVLTIKGEKKY
TSEVSEENYYFSERSYGSFSRSMTLPNNTSIQNIAATLDNGILEISIPKVSEAKAKKVSVTKAAKTRKANINTKPGNPKT
KS
>Mature_161_residues
TLERWQPGWSLRPWRPFREILSPGLWSMLANERDWLPATEMLELKDKYLIKAEMPGINEEDIEVSVSDNVLTIKGEKKYT
SEVSEENYYFSERSYGSFSRSMTLPNNTSIQNIAATLDNGILEISIPKVSEAKAKKVSVTKAAKTRKANINTKPGNPKTK
S

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18399; Mature: 18268

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLERWQPGWSLRPWRPFREILSPGLWSMLANERDWLPATEMLELKDKYLIKAEMPGINE
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCC
EDIEVSVSDNVLTIKGEKKYTSEVSEENYYFSERSYGSFSRSMTLPNNTSIQNIAATLDN
CCEEEEECCCEEEEECCCHHHHHCCCCCEEECCCCCCCCCCEEECCCCCCHHHHHHHHCC
GILEISIPKVSEAKAKKVSVTKAAKTRKANINTKPGNPKTKS
CEEEEECCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLERWQPGWSLRPWRPFREILSPGLWSMLANERDWLPATEMLELKDKYLIKAEMPGINE
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCC
EDIEVSVSDNVLTIKGEKKYTSEVSEENYYFSERSYGSFSRSMTLPNNTSIQNIAATLDN
CCEEEEECCCEEEEECCCHHHHHCCCCCEEECCCCCCCCCCEEECCCCCCHHHHHHHHCC
GILEISIPKVSEAKAKKVSVTKAAKTRKANINTKPGNPKTKS
CEEEEECCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA