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The map label for this gene is 57233959

Identifier: 57233959

GI number: 57233959

Start: 1153182

End: 1154012

Strand: Direct

Name: 57233959

Synonym: DET1266

Alternate gene names: NA

Gene position: 1153182-1154012 (Clockwise)

Preceding gene: 57233960

Following gene: 57233958

Centisome position: 78.46

GC content: 51.62

Gene sequence:

>831_bases
GTGATTGACAGTACTTCGGATATAACCCCCCAGATGGCCAAAGTCATGGGCAATGTGCATATAATGCCGCTCACTGTATC
CTTCGGGAACGAACACTTTCAGGATGGCATAGATATAACCCCGGAAACATTTTATACCCGTCTGGTTCATGACAGTAACG
TTCCCACTACTACCCAGCCCCTGCCCGGATATGTGATGGAACTGGTAAGCCGTCTTTCAAAAGAAACCGACCAGATACTT
ATTCTGACTCTGTCCCAGAAACTCAGCGGCACTTATCAGTCTGCACTTTACACTAAAAAAACGCTGGAAAGCCCTGGCTG
CCGCATAGAGGTGCTGGATACCCAGCTGACTACCCTCGGGCACGGGCTCAGGGCAGTCCGGGCATCGGATATGGCCAAAG
AAGGGGCTAATCTGGACCAGATACTGGAAGAACTCAGAAAACCCCATAACTATCTGGCGGGGGTTATGTATTTTGACACC
CTGAAATACCTGGCCAGAGGCGGGCGGATTGGCAAAGCCCAGAGCCTGCTGGGGGCTATGCTTTCATTCAAGCCCATTAT
TACCGTTCAGGACGGAGAGGTCAGCCCGGTAACCAGAGTGCGTTCCCATCAGGCGGGTATGGATTACCTTTACAACTATG
CCGCCAGCCGCAAGAATATCCACTATCTGGGGGTTGAACACGCCAACACACCCGAAGTAGCCGAAAGTCTGATAGACCGT
TTGGGTAATATCTTCCCCAAAGAAAAGATAATCCGTTCACGGATAGGCCCAGTCATCGGCACATCTATCGGCCCTAATGC
TGTCTGCGTGGTAGCCTGGGCAGATGCCTAG

Upstream 100 bases:

>100_bases
GGTAGTAGGCACATACACAGGGCCTAATACCCTGTGTTTAAACATCATCGGGAAAAGCCGGTAACAGGATTTTGGAGGCT
TTAATTTGAATGTCCAGATT

Downstream 100 bases:

>100_bases
ATAAAAATCTGATTTAAAGGTATGAATAATTGAGCGTAAAAATAGTCACTGACAGCACCGTGGATTTACTCCCGGAAACT
ATAAAAGAACTGGGCATAAC

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIDSTSDITPQMAKVMGNVHIMPLTVSFGNEHFQDGIDITPETFYTRLVHDSNVPTTTQPLPGYVMELVSRLSKETDQIL
ILTLSQKLSGTYQSALYTKKTLESPGCRIEVLDTQLTTLGHGLRAVRASDMAKEGANLDQILEELRKPHNYLAGVMYFDT
LKYLARGGRIGKAQSLLGAMLSFKPIITVQDGEVSPVTRVRSHQAGMDYLYNYAASRKNIHYLGVEHANTPEVAESLIDR
LGNIFPKEKIIRSRIGPVIGTSIGPNAVCVVAWADA

Sequences:

>Translated_276_residues
MIDSTSDITPQMAKVMGNVHIMPLTVSFGNEHFQDGIDITPETFYTRLVHDSNVPTTTQPLPGYVMELVSRLSKETDQIL
ILTLSQKLSGTYQSALYTKKTLESPGCRIEVLDTQLTTLGHGLRAVRASDMAKEGANLDQILEELRKPHNYLAGVMYFDT
LKYLARGGRIGKAQSLLGAMLSFKPIITVQDGEVSPVTRVRSHQAGMDYLYNYAASRKNIHYLGVEHANTPEVAESLIDR
LGNIFPKEKIIRSRIGPVIGTSIGPNAVCVVAWADA
>Mature_276_residues
MIDSTSDITPQMAKVMGNVHIMPLTVSFGNEHFQDGIDITPETFYTRLVHDSNVPTTTQPLPGYVMELVSRLSKETDQIL
ILTLSQKLSGTYQSALYTKKTLESPGCRIEVLDTQLTTLGHGLRAVRASDMAKEGANLDQILEELRKPHNYLAGVMYFDT
LKYLARGGRIGKAQSLLGAMLSFKPIITVQDGEVSPVTRVRSHQAGMDYLYNYAASRKNIHYLGVEHANTPEVAESLIDR
LGNIFPKEKIIRSRIGPVIGTSIGPNAVCVVAWADA

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30390; Mature: 30390

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSTSDITPQMAKVMGNVHIMPLTVSFGNEHFQDGIDITPETFYTRLVHDSNVPTTTQP
CCCCCCCCCHHHHHHHCCEEEEEEEEECCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
LPGYVMELVSRLSKETDQILILTLSQKLSGTYQSALYTKKTLESPGCRIEVLDTQLTTLG
CCHHHHHHHHHHHCCCCEEEEEEECHHHCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHH
HGLRAVRASDMAKEGANLDQILEELRKPHNYLAGVMYFDTLKYLARGGRIGKAQSLLGAM
HHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSFKPIITVQDGEVSPVTRVRSHQAGMDYLYNYAASRKNIHYLGVEHANTPEVAESLIDR
HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
LGNIFPKEKIIRSRIGPVIGTSIGPNAVCVVAWADA
HHCCCCHHHHHHHHCCHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MIDSTSDITPQMAKVMGNVHIMPLTVSFGNEHFQDGIDITPETFYTRLVHDSNVPTTTQP
CCCCCCCCCHHHHHHHCCEEEEEEEEECCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
LPGYVMELVSRLSKETDQILILTLSQKLSGTYQSALYTKKTLESPGCRIEVLDTQLTTLG
CCHHHHHHHHHHHCCCCEEEEEEECHHHCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHH
HGLRAVRASDMAKEGANLDQILEELRKPHNYLAGVMYFDTLKYLARGGRIGKAQSLLGAM
HHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSFKPIITVQDGEVSPVTRVRSHQAGMDYLYNYAASRKNIHYLGVEHANTPEVAESLIDR
HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
LGNIFPKEKIIRSRIGPVIGTSIGPNAVCVVAWADA
HHCCCCHHHHHHHHCCHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]