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The map label for this gene is 57233960

Identifier: 57233960

GI number: 57233960

Start: 1152300

End: 1153145

Strand: Direct

Name: 57233960

Synonym: DET1265

Alternate gene names: NA

Gene position: 1152300-1153145 (Clockwise)

Preceding gene: 57233961

Following gene: 57233959

Centisome position: 78.4

GC content: 50.95

Gene sequence:

>846_bases
ATGGCGGTAAAAATAATAACCGACAGCACTTCGGATATTCCGCCCGAAATGGCTACAAATATGGGGATTACAGTAATCCC
CTTAACTGTCTCTTTCGGCAGTGAACACTTTCTGGATAATGTGACCCTGAAACCGGATGAATTTTACCGCCGCCTTTCCC
AAAGCGGTATTTACCCCCAGACTACTCAGCCGTCACCGGCCGTATTTAAAGACAACTATGAAAAACTGATGCCGGAAGCC
GAAGGCATACTGGTTATTACTATCTCATCCAAGCTCTCCGGCACTTACCAGTCTGCTTTGAGCGCCGTAAGTATGCTGGA
AAACCCCACCTGCCCCGTAGAAGTAATAGATTCGCAGACAGTCAGCCTGGCACTGGGACTACTGGCGGTAAAAGCAAGTG
AGCTGGCCAGAAGCGGAAAAACCCTGGCAGAGATAAAAGAAGCCATAACCCAAAGCCTGCCTGATGCCCAGCCGCTTATG
TTTTTTGATACCCTGACCTATTTGCAAAAGGGCGGACGCATAGGCCGCGCCCAGAGTATGCTGGGTTCGCTCCTTTCAGT
AAAGCCCCTGCTGACTGTACGGGACGGGGTGGTAACCCCCTTGACCAGAGTGCGCTCACTTCAAGCCGGTATGGACCAGC
TTTACAACTTTGCCGCCCAGCACAGCACCCTTGAATATGTAGGTATCGGTTATGCCACCTCTACTACCGATGCCCTGAAA
CTGAAGGAACGCCTCGCTCCCCTGTTTCCGCCTGAAAAGATATATATTACCCAGGTGGGGCCGGTAGTAGGCACATACAC
AGGGCCTAATACCCTGTGTTTAAACATCATCGGGAAAAGCCGGTAA

Upstream 100 bases:

>100_bases
ATATACCGGTCACAGATTGGGCCGGTGGTAGGCGCCTATACCGGAGCGAATGCGGTAGCTGTTACCGTTCTGGAAGATAA
ATAATTTTAAGGAGCTGGAT

Downstream 100 bases:

>100_bases
CAGGATTTTGGAGGCTTTAATTTGAATGTCCAGATTGTGATTGACAGTACTTCGGATATAACCCCCCAGATGGCCAAAGT
CATGGGCAATGTGCATATAA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAVKIITDSTSDIPPEMATNMGITVIPLTVSFGSEHFLDNVTLKPDEFYRRLSQSGIYPQTTQPSPAVFKDNYEKLMPEA
EGILVITISSKLSGTYQSALSAVSMLENPTCPVEVIDSQTVSLALGLLAVKASELARSGKTLAEIKEAITQSLPDAQPLM
FFDTLTYLQKGGRIGRAQSMLGSLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAAQHSTLEYVGIGYATSTTDALK
LKERLAPLFPPEKIYITQVGPVVGTYTGPNTLCLNIIGKSR

Sequences:

>Translated_281_residues
MAVKIITDSTSDIPPEMATNMGITVIPLTVSFGSEHFLDNVTLKPDEFYRRLSQSGIYPQTTQPSPAVFKDNYEKLMPEA
EGILVITISSKLSGTYQSALSAVSMLENPTCPVEVIDSQTVSLALGLLAVKASELARSGKTLAEIKEAITQSLPDAQPLM
FFDTLTYLQKGGRIGRAQSMLGSLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAAQHSTLEYVGIGYATSTTDALK
LKERLAPLFPPEKIYITQVGPVVGTYTGPNTLCLNIIGKSR
>Mature_280_residues
AVKIITDSTSDIPPEMATNMGITVIPLTVSFGSEHFLDNVTLKPDEFYRRLSQSGIYPQTTQPSPAVFKDNYEKLMPEAE
GILVITISSKLSGTYQSALSAVSMLENPTCPVEVIDSQTVSLALGLLAVKASELARSGKTLAEIKEAITQSLPDAQPLMF
FDTLTYLQKGGRIGRAQSMLGSLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAAQHSTLEYVGIGYATSTTDALKL
KERLAPLFPPEKIYITQVGPVVGTYTGPNTLCLNIIGKSR

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30377; Mature: 30245

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKIITDSTSDIPPEMATNMGITVIPLTVSFGSEHFLDNVTLKPDEFYRRLSQSGIYPQ
CEEEEEECCCCCCCHHHHHCCCEEEEEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCCC
TTQPSPAVFKDNYEKLMPEAEGILVITISSKLSGTYQSALSAVSMLENPTCPVEVIDSQT
CCCCCCCHHHCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCHH
VSLALGLLAVKASELARSGKTLAEIKEAITQSLPDAQPLMFFDTLTYLQKGGRIGRAQSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH
LGSLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAAQHSTLEYVGIGYATSTTDALK
HHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
LKERLAPLFPPEKIYITQVGPVVGTYTGPNTLCLNIIGKSR
HHHHHCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure 
AVKIITDSTSDIPPEMATNMGITVIPLTVSFGSEHFLDNVTLKPDEFYRRLSQSGIYPQ
EEEEEECCCCCCCHHHHHCCCEEEEEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCCC
TTQPSPAVFKDNYEKLMPEAEGILVITISSKLSGTYQSALSAVSMLENPTCPVEVIDSQT
CCCCCCCHHHCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCHH
VSLALGLLAVKASELARSGKTLAEIKEAITQSLPDAQPLMFFDTLTYLQKGGRIGRAQSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH
LGSLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAAQHSTLEYVGIGYATSTTDALK
HHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
LKERLAPLFPPEKIYITQVGPVVGTYTGPNTLCLNIIGKSR
HHHHHCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]