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The map label for this gene is 57233958

Identifier: 57233958

GI number: 57233958

Start: 1154042

End: 1154977

Strand: Direct

Name: 57233958

Synonym: DET1267

Alternate gene names: NA

Gene position: 1154042-1154977 (Clockwise)

Preceding gene: 57233959

Following gene: 57233949

Centisome position: 78.52

GC content: 50.0

Gene sequence:

>936_bases
TTGAGCGTAAAAATAGTCACTGACAGCACCGTGGATTTACTCCCGGAAACTATAAAAGAACTGGGCATAACGGTAGTGCC
GGTATATGTAATGTCCGGCAACAAGACCTACAGGGACGGGCTGGATATCAGCCAAACCGAAATCTACAACCGTATGCTTG
AGGGCGAACAGTTCACCACCTCCCAGCCTACCCCGGCTGATTTTGCCAATGCATATAAAACACTTTCAAAGGAAACTGAC
CAGATAGTCTCCCTGATTATGGGTGCCAAACTATCAGGCACTTATAATTCGGCGTTGCAGGGGCGTGAACTGGCACAAAG
CAGCAGCAATATAGAGCTGATAGATACCAAGGCTACTTCCGGGGCTTTGGGTTTGCTGGCTACCCAGGCGGCTGAAATGG
CAAAAATGGGTGAAAGCGCCGGGAATATAGTAAACAGCATCAAGAGCTATATCCCCCAGGTACATATCTGGGCTTTGCTG
GATACCATAAAATATGTGCTGAAGAGCGGGCGTCTCAGCAGCGCCTCCAACCTTATCAGCGGGGTTTTGAGTATCCGCCC
CATGCTTACCCTTAGAGACGGCTCTCTCTGGCCGGCCAGTATCCACCGCACCCGCAATAAAGGTATTGAAAAACTGACCG
AACTGGTAAAAAATAACCGCAATCTGGAAGCAGTCCAGATTGTCCAAAGCGTAGATTTGGCAGAAGCCCATGGTATAAAG
GAAAAGCTGGCTGATTTTATTGACCAGAGCAAAATCCATATCTCACAGCTTGGGCCTGCTTTGGGTGTCCACGGCGGCCC
CGGCACTTTGGTAGTGGCTATCAGGGAAAAGCTGAGCGGTATAGGCACAGCGTCTCCAGACGAAACGGAAGACAAGAAAT
CATTTAAGCTGCCCTCTATCCACCTGCCCAAGCTGGGCTTTTCCAGCCTGCACTAG

Upstream 100 bases:

>100_bases
GGATAGGCCCAGTCATCGGCACATCTATCGGCCCTAATGCTGTCTGCGTGGTAGCCTGGGCAGATGCCTAGATAAAAATC
TGATTTAAAGGTATGAATAA

Downstream 100 bases:

>100_bases
TTTTTAAAAACATATTAGGCTTGAAGCCCTCCTTAAAAGGAGGGCTTTTTTATGCAGGGATAGTGTGGACAAGTGAGGGT
ATATGGTCTATCATTTTTAA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSVKIVTDSTVDLLPETIKELGITVVPVYVMSGNKTYRDGLDISQTEIYNRMLEGEQFTTSQPTPADFANAYKTLSKETD
QIVSLIMGAKLSGTYNSALQGRELAQSSSNIELIDTKATSGALGLLATQAAEMAKMGESAGNIVNSIKSYIPQVHIWALL
DTIKYVLKSGRLSSASNLISGVLSIRPMLTLRDGSLWPASIHRTRNKGIEKLTELVKNNRNLEAVQIVQSVDLAEAHGIK
EKLADFIDQSKIHISQLGPALGVHGGPGTLVVAIREKLSGIGTASPDETEDKKSFKLPSIHLPKLGFSSLH

Sequences:

>Translated_311_residues
MSVKIVTDSTVDLLPETIKELGITVVPVYVMSGNKTYRDGLDISQTEIYNRMLEGEQFTTSQPTPADFANAYKTLSKETD
QIVSLIMGAKLSGTYNSALQGRELAQSSSNIELIDTKATSGALGLLATQAAEMAKMGESAGNIVNSIKSYIPQVHIWALL
DTIKYVLKSGRLSSASNLISGVLSIRPMLTLRDGSLWPASIHRTRNKGIEKLTELVKNNRNLEAVQIVQSVDLAEAHGIK
EKLADFIDQSKIHISQLGPALGVHGGPGTLVVAIREKLSGIGTASPDETEDKKSFKLPSIHLPKLGFSSLH
>Mature_310_residues
SVKIVTDSTVDLLPETIKELGITVVPVYVMSGNKTYRDGLDISQTEIYNRMLEGEQFTTSQPTPADFANAYKTLSKETDQ
IVSLIMGAKLSGTYNSALQGRELAQSSSNIELIDTKATSGALGLLATQAAEMAKMGESAGNIVNSIKSYIPQVHIWALLD
TIKYVLKSGRLSSASNLISGVLSIRPMLTLRDGSLWPASIHRTRNKGIEKLTELVKNNRNLEAVQIVQSVDLAEAHGIKE
KLADFIDQSKIHISQLGPALGVHGGPGTLVVAIREKLSGIGTASPDETEDKKSFKLPSIHLPKLGFSSLH

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 33538; Mature: 33407

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKIVTDSTVDLLPETIKELGITVVPVYVMSGNKTYRDGLDISQTEIYNRMLEGEQFTT
CEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC
SQPTPADFANAYKTLSKETDQIVSLIMGAKLSGTYNSALQGRELAQSSSNIELIDTKATS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
GALGLLATQAAEMAKMGESAGNIVNSIKSYIPQVHIWALLDTIKYVLKSGRLSSASNLIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVLSIRPMLTLRDGSLWPASIHRTRNKGIEKLTELVKNNRNLEAVQIVQSVDLAEAHGIK
HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH
EKLADFIDQSKIHISQLGPALGVHGGPGTLVVAIREKLSGIGTASPDETEDKKSFKLPSI
HHHHHHHHHCCHHHHHCCCHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHCCCCCC
HLPKLGFSSLH
CCCCCCCCCCC
>Mature Secondary Structure 
SVKIVTDSTVDLLPETIKELGITVVPVYVMSGNKTYRDGLDISQTEIYNRMLEGEQFTT
EEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC
SQPTPADFANAYKTLSKETDQIVSLIMGAKLSGTYNSALQGRELAQSSSNIELIDTKATS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
GALGLLATQAAEMAKMGESAGNIVNSIKSYIPQVHIWALLDTIKYVLKSGRLSSASNLIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVLSIRPMLTLRDGSLWPASIHRTRNKGIEKLTELVKNNRNLEAVQIVQSVDLAEAHGIK
HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH
EKLADFIDQSKIHISQLGPALGVHGGPGTLVVAIREKLSGIGTASPDETEDKKSFKLPSI
HHHHHHHHHCCHHHHHCCCHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHCCCCCC
HLPKLGFSSLH
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]