| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233559
Identifier: 57233559
GI number: 57233559
Start: 73164
End: 74357
Strand: Direct
Name: 57233559
Synonym: DET0075
Alternate gene names: NA
Gene position: 73164-74357 (Clockwise)
Preceding gene: 57233567
Following gene: 57233558
Centisome position: 4.98
GC content: 46.31
Gene sequence:
>1194_bases TTGTCATTGGTTTACCGTCCTTTCTTAAGACAAAAAGTCGTCATCATCGTCTGTTGCGAAATCGGACTCGGCAGTTTTAA GTCTACCCTCACCAGTTTGGCCCTTTGCCACTTCGGAGACTTTGATTCCCGGCATATCCCTGCTTCTTGGGTTGATACCG ATAATGCTTTAGAAAAGCTGATGTTCTTATGCAAGGATGCCCCTCTTCTTATTGATGACTGGGCACCGGGGCAGGACGCG GGAAAAGCCCGCCAGCTGGAAACAAGAGCGGAGCGTATTGTCAGGGCCCAGGGCAACCGCCAGGGCAAAGGGCGCTTAAG ATCTGATACATCTGCCCGCCCGAGCTATATTCCCCGCGGTATGCTCATTACATCAGGGGAGCAACTGCCTTCCGGCCACA GCCACACTGCCAGGCTCTACACGGTAGAGCTGGAACGTGAGGATATAGATATCAATAACTTAACTACCGCGCAGCAAAAC ACCCCGTATTATCGCCAGGCAATGGCCCACTACTTAACTTGGCTTTCAGGTAAATGGGATTCTATTAAGAAATCCATCCC GGATGATTTTTTGGCGTTAAGGGGTCAAGTTATGAATAAAGGCCTTCATGCACGGTTGCCTGAGGTTATTGCTCTACTTT GCTTAGGGCTTAAGTATGGGCTTGATTTTGCAGTGGAATGCGGAGCCCTCACCCTTGAGGAGTCTAACGAGGTTTGGGAA GAAGGGATGAGTGCATTTATTTCACAAGCAACAGACCAAGGATCTAGAGTTGAAGAAGAGCGGCCGGCAAAACGTTTTAT TGAGATACTTAATTCACTAAAAGAATCAGGATCCGCGATACTTGGCGATAGGAATGATGACTGTATAAGGCAAGTGGGCC CGGCACAAACACTGGTTGGGTGGAATGATCAGCAAAACGGACATGTCCTTATACTTGGCCAAACTGCATATAAAGCGGTT AAAGATCATTGCCGTCGCACTGATGAACCCTACACTATCAAATACAATGCGGTTATAAAAGATTTGAGAAGAATGGGGTA TATAGACTGCCCCAGTCAAAAAATAGCTACTCATAATGTCTGTATAGCCAATGGGCAAAAAAGAGTACTCAAGCTTAGGA AAGTATTATTAAATGAAAGAGAAAATAATGATGAAAATAACGCTTTTTCCGCGCCGGGCCCTCTTATGTTGTAA
Upstream 100 bases:
>100_bases TTTGCCCTCTTGCGATCGCCTCGAATGCTCTGAATCATTGAGATCAGGAACGTGACACAGAGAGCTGAGTACAATCCTAA AAGGATGTTTAGTAAAATCG
Downstream 100 bases:
>100_bases AAGGTGTAGAGGTGTAGAATGATGTTTTTTCCAAACGTAACTTACGTACTCTACACTTTTTTAAAAAAAGGTGTAGAAAA GTGTAGAGAGAAGTGTAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Primase Domain Protein; Transcriptional Regulator; Regulatory Protein; DNA Primase Domain-Containing Protein
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSLVYRPFLRQKVVIIVCCEIGLGSFKSTLTSLALCHFGDFDSRHIPASWVDTDNALEKLMFLCKDAPLLIDDWAPGQDA GKARQLETRAERIVRAQGNRQGKGRLRSDTSARPSYIPRGMLITSGEQLPSGHSHTARLYTVELEREDIDINNLTTAQQN TPYYRQAMAHYLTWLSGKWDSIKKSIPDDFLALRGQVMNKGLHARLPEVIALLCLGLKYGLDFAVECGALTLEESNEVWE EGMSAFISQATDQGSRVEEERPAKRFIEILNSLKESGSAILGDRNDDCIRQVGPAQTLVGWNDQQNGHVLILGQTAYKAV KDHCRRTDEPYTIKYNAVIKDLRRMGYIDCPSQKIATHNVCIANGQKRVLKLRKVLLNERENNDENNAFSAPGPLML
Sequences:
>Translated_397_residues MSLVYRPFLRQKVVIIVCCEIGLGSFKSTLTSLALCHFGDFDSRHIPASWVDTDNALEKLMFLCKDAPLLIDDWAPGQDA GKARQLETRAERIVRAQGNRQGKGRLRSDTSARPSYIPRGMLITSGEQLPSGHSHTARLYTVELEREDIDINNLTTAQQN TPYYRQAMAHYLTWLSGKWDSIKKSIPDDFLALRGQVMNKGLHARLPEVIALLCLGLKYGLDFAVECGALTLEESNEVWE EGMSAFISQATDQGSRVEEERPAKRFIEILNSLKESGSAILGDRNDDCIRQVGPAQTLVGWNDQQNGHVLILGQTAYKAV KDHCRRTDEPYTIKYNAVIKDLRRMGYIDCPSQKIATHNVCIANGQKRVLKLRKVLLNERENNDENNAFSAPGPLML >Mature_396_residues SLVYRPFLRQKVVIIVCCEIGLGSFKSTLTSLALCHFGDFDSRHIPASWVDTDNALEKLMFLCKDAPLLIDDWAPGQDAG KARQLETRAERIVRAQGNRQGKGRLRSDTSARPSYIPRGMLITSGEQLPSGHSHTARLYTVELEREDIDINNLTTAQQNT PYYRQAMAHYLTWLSGKWDSIKKSIPDDFLALRGQVMNKGLHARLPEVIALLCLGLKYGLDFAVECGALTLEESNEVWEE GMSAFISQATDQGSRVEEERPAKRFIEILNSLKESGSAILGDRNDDCIRQVGPAQTLVGWNDQQNGHVLILGQTAYKAVK DHCRRTDEPYTIKYNAVIKDLRRMGYIDCPSQKIATHNVCIANGQKRVLKLRKVLLNERENNDENNAFSAPGPLML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44560; Mature: 44429
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVYRPFLRQKVVIIVCCEIGLGSFKSTLTSLALCHFGDFDSRHIPASWVDTDNALEKL CCCCCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHH MFLCKDAPLLIDDWAPGQDAGKARQLETRAERIVRAQGNRQGKGRLRSDTSARPSYIPRG HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC MLITSGEQLPSGHSHTARLYTVELEREDIDINNLTTAQQNTPYYRQAMAHYLTWLSGKWD EEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH SIKKSIPDDFLALRGQVMNKGLHARLPEVIALLCLGLKYGLDFAVECGALTLEESNEVWE HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHH EGMSAFISQATDQGSRVEEERPAKRFIEILNSLKESGSAILGDRNDDCIRQVGPAQTLVG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCHHEEC WNDQQNGHVLILGQTAYKAVKDHCRRTDEPYTIKYNAVIKDLRRMGYIDCPSQKIATHNV CCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHCCCCE CIANGQKRVLKLRKVLLNERENNDENNAFSAPGPLML EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLVYRPFLRQKVVIIVCCEIGLGSFKSTLTSLALCHFGDFDSRHIPASWVDTDNALEKL CCCCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHH MFLCKDAPLLIDDWAPGQDAGKARQLETRAERIVRAQGNRQGKGRLRSDTSARPSYIPRG HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC MLITSGEQLPSGHSHTARLYTVELEREDIDINNLTTAQQNTPYYRQAMAHYLTWLSGKWD EEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH SIKKSIPDDFLALRGQVMNKGLHARLPEVIALLCLGLKYGLDFAVECGALTLEESNEVWE HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHH EGMSAFISQATDQGSRVEEERPAKRFIEILNSLKESGSAILGDRNDDCIRQVGPAQTLVG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCHHEEC WNDQQNGHVLILGQTAYKAVKDHCRRTDEPYTIKYNAVIKDLRRMGYIDCPSQKIATHNV CCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHCCCCE CIANGQKRVLKLRKVLLNERENNDENNAFSAPGPLML EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA