Definition Bacillus clausii KSM-K16, complete genome.
Accession NC_006582
Length 4,303,871

Click here to switch to the map view.

The map label for this gene is yiaA [H]

Identifier: 56965363

GI number: 56965363

Start: 3755329

End: 3755799

Strand: Direct

Name: yiaA [H]

Synonym: ABC3601

Alternate gene names: 56965363

Gene position: 3755329-3755799 (Clockwise)

Preceding gene: 56965343

Following gene: 56965365

Centisome position: 87.25

GC content: 39.07

Gene sequence:

>471_bases
ATGTCTAATGAGCATGAGGTTTTATTAGATAATGAAAAACAAAATGAGCCCGAAATCAAAGTAGAAAGAAGAGAGGGAGA
ACCAACTGGAGCCTTCAAAGGGGCTACTTGGGCTGCGTTGATAGTGGGTGTCGGTGCGTATTTTATCGGCTTGTTTAACG
CAAATATGGAACTGAACGAAAAAGGATATTACTTTGCCGTTTTAATCTTCGGACTCTATTCATCAGTATCTTTGCAAAAG
GCAGTAAGAGATAAAGATGAAGGCATACCTGTTACGAGTATTTATTATGGGATTAGTTGGGTTGCACTTATTGTCGCTAT
TTTATTAATGGGTATCGGTTTATACAATGCAGGCAGCATTGTTCTGAGCGAAAAAGGATTTTATGGCATGTCTTTTGTCC
TTAGCTTATTTGCCGCGATCACTGTTCAGAAAAATATTAGGGACACACAACGGGCAAGAGAAAGAGATTGA

Upstream 100 bases:

>100_bases
GCCTTTTTGCATACAATTTCTATATAATAAGAGCTAGGCAAAGGCAGGACAGTATACTTGCCATGCTGATTTTATGAATA
AAGACGGAGGTGAACCATTC

Downstream 100 bases:

>100_bases
GTAGTCCGTTTGCCTTACATGGAACATGTAATCTACATAAAAAAATGAACCTTGGACGGGGTTCATTTTTTTGTTGTAAT
GAAAGGATGAATAAACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSNEHEVLLDNEKQNEPEIKVERREGEPTGAFKGATWAALIVGVGAYFIGLFNANMELNEKGYYFAVLIFGLYSSVSLQK
AVRDKDEGIPVTSIYYGISWVALIVAILLMGIGLYNAGSIVLSEKGFYGMSFVLSLFAAITVQKNIRDTQRARERD

Sequences:

>Translated_156_residues
MSNEHEVLLDNEKQNEPEIKVERREGEPTGAFKGATWAALIVGVGAYFIGLFNANMELNEKGYYFAVLIFGLYSSVSLQK
AVRDKDEGIPVTSIYYGISWVALIVAILLMGIGLYNAGSIVLSEKGFYGMSFVLSLFAAITVQKNIRDTQRARERD
>Mature_155_residues
SNEHEVLLDNEKQNEPEIKVERREGEPTGAFKGATWAALIVGVGAYFIGLFNANMELNEKGYYFAVLIFGLYSSVSLQKA
VRDKDEGIPVTSIYYGISWVALIVAILLMGIGLYNAGSIVLSEKGFYGMSFVLSLFAAITVQKNIRDTQRARERD

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=118, Percent_Identity=58.4745762711864, Blast_Score=143, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 17309; Mature: 17178

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEHEVLLDNEKQNEPEIKVERREGEPTGAFKGATWAALIVGVGAYFIGLFNANMELNE
CCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECC
KGYYFAVLIFGLYSSVSLQKAVRDKDEGIPVTSIYYGISWVALIVAILLMGIGLYNAGSI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VLSEKGFYGMSFVLSLFAAITVQKNIRDTQRARERD
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNEHEVLLDNEKQNEPEIKVERREGEPTGAFKGATWAALIVGVGAYFIGLFNANMELNE
CCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECC
KGYYFAVLIFGLYSSVSLQKAVRDKDEGIPVTSIYYGISWVALIVAILLMGIGLYNAGSI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VLSEKGFYGMSFVLSLFAAITVQKNIRDTQRARERD
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]