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The map label for this gene is 56963701

Identifier: 56963701

GI number: 56963701

Start: 2051272

End: 2051874

Strand: Direct

Name: 56963701

Synonym: ABC1936

Alternate gene names: NA

Gene position: 2051272-2051874 (Clockwise)

Preceding gene: 56963700

Following gene: 56963702

Centisome position: 47.66

GC content: 46.93

Gene sequence:

>603_bases
ATGGAACAACAAAAAGCGCTCGATCTGTCTTTTTTTGAGCAATCAACAATCGAAGTGGCAAAAGGGCTCATTGGCATGCA
TTTGGTACATGAGTTAGACGGCGTAACGTTGATTGGCCGAATAACAGAAACCGAGGCATATCTAGGAGTGCTTGACCGAG
CGTGCCACAGCTATGGCAGGCGTCGGACAAAACGGACAGCTATTTTGTATGAAGAGGCTGGAAGATGTTACACATATACG
ATGCATACCCATTGTTTGTTAAACGTTGTATGTGAACAAAAAGGACAACCTGAGGCTGTGCTCATTCGTGCCATTGAACC
TATTAGCGGCGTTAAAGAAATGGAGCGGCTACGAGGCAAACCACATACAAGCCGTGAATTTGCAAATGGACCAGGTAAAT
TAACAAAAGCAATGGGGATTACAATGGCAGACTATGGCCGGCTTTTAACCGAACCTCCGCTTTATTTTGCGAAAGGGGAC
CACACAAACGCATCCATTGTGGCGACAAAACGTATCGGCATTAAAGGCGCTGGTCCATGCAGCCACCACCCATGGCGGTT
TATTGATGGGAACAGTCGTGCTGTATCGGCTTATCGGCCTTGA

Upstream 100 bases:

>100_bases
GGGCTAGAATGGTTTTTGCCTGTAGGAGATGTACGTCACTATGAATAACGGCCAATCTGTGCTTAAATAAAGGAGGATGA
CTGGAGAAAGGACTGTCACA

Downstream 100 bases:

>100_bases
TCGAATGTGAGGACAGAGAAAGGAATGGGAGAATTGGAAATACAATCGTTAGCGGTGTTTTGTGGGTCTAGTGCTGGCAA
AGATCCAGTTTATATCGAAC

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEQQKALDLSFFEQSTIEVAKGLIGMHLVHELDGVTLIGRITETEAYLGVLDRACHSYGRRRTKRTAILYEEAGRCYTYT
MHTHCLLNVVCEQKGQPEAVLIRAIEPISGVKEMERLRGKPHTSREFANGPGKLTKAMGITMADYGRLLTEPPLYFAKGD
HTNASIVATKRIGIKGAGPCSHHPWRFIDGNSRAVSAYRP

Sequences:

>Translated_200_residues
MEQQKALDLSFFEQSTIEVAKGLIGMHLVHELDGVTLIGRITETEAYLGVLDRACHSYGRRRTKRTAILYEEAGRCYTYT
MHTHCLLNVVCEQKGQPEAVLIRAIEPISGVKEMERLRGKPHTSREFANGPGKLTKAMGITMADYGRLLTEPPLYFAKGD
HTNASIVATKRIGIKGAGPCSHHPWRFIDGNSRAVSAYRP
>Mature_200_residues
MEQQKALDLSFFEQSTIEVAKGLIGMHLVHELDGVTLIGRITETEAYLGVLDRACHSYGRRRTKRTAILYEEAGRCYTYT
MHTHCLLNVVCEQKGQPEAVLIRAIEPISGVKEMERLRGKPHTSREFANGPGKLTKAMGITMADYGRLLTEPPLYFAKGD
HTNASIVATKRIGIKGAGPCSHHPWRFIDGNSRAVSAYRP

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family

Homologues:

Organism=Homo sapiens, GI62632769, Length=203, Percent_Identity=33.4975369458128, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI62632765, Length=155, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI62632771, Length=203, Percent_Identity=33.4975369458128, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 3MGH_BACSK (Q5WGN4)

Other databases:

- EMBL:   AP006627
- RefSeq:   YP_175432.1
- HSSP:   P29372
- ProteinModelPortal:   Q5WGN4
- SMR:   Q5WGN4
- STRING:   Q5WGN4
- EnsemblBacteria:   EBBACT00000049159
- GeneID:   3203038
- GenomeReviews:   AP006627_GR
- KEGG:   bcl:ABC1936
- NMPDR:   fig|66692.3.peg.1806
- eggNOG:   COG2094
- GeneTree:   EBGT00050000001691
- HOGENOM:   HBG664239
- OMA:   CANIVCG
- ProtClustDB:   PRK00802
- BioCyc:   BCLA66692:ABC1936-MONOMER
- HAMAP:   MF_00527
- InterPro:   IPR011034
- InterPro:   IPR003180
- Gene3D:   G3DSA:3.10.300.10
- PANTHER:   PTHR10429
- TIGRFAMs:   TIGR00567

Pfam domain/function: PF02245 Pur_DNA_glyco; SSF50486 FMT_C_like

EC number: 3.2.2.-

Molecular weight: Translated: 22269; Mature: 22269

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQKALDLSFFEQSTIEVAKGLIGMHLVHELDGVTLIGRITETEAYLGVLDRACHSYGR
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHH
RRTKRTAILYEEAGRCYTYTMHTHCLLNVVCEQKGQPEAVLIRAIEPISGVKEMERLRGK
HHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCC
PHTSREFANGPGKLTKAMGITMADYGRLLTEPPLYFAKGDHTNASIVATKRIGIKGAGPC
CCCCHHHCCCCCHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCC
SHHPWRFIDGNSRAVSAYRP
CCCCEEEECCCCCEEECCCC
>Mature Secondary Structure
MEQQKALDLSFFEQSTIEVAKGLIGMHLVHELDGVTLIGRITETEAYLGVLDRACHSYGR
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHH
RRTKRTAILYEEAGRCYTYTMHTHCLLNVVCEQKGQPEAVLIRAIEPISGVKEMERLRGK
HHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCC
PHTSREFANGPGKLTKAMGITMADYGRLLTEPPLYFAKGDHTNASIVATKRIGIKGAGPC
CCCCHHHCCCCCHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCC
SHHPWRFIDGNSRAVSAYRP
CCCCEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA