| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
Click here to switch to the map view.
The map label for this gene is rrmA [C]
Identifier: 56963687
GI number: 56963687
Start: 2035690
End: 2036442
Strand: Direct
Name: rrmA [C]
Synonym: ABC1922
Alternate gene names: 56963687
Gene position: 2035690-2036442 (Clockwise)
Preceding gene: 56963685
Following gene: 56963689
Centisome position: 47.3
GC content: 45.15
Gene sequence:
>753_bases ATGGCATATAGCAAGACCTTTTTAGAACAAGTAGAAACAGCAATGAAGCAGTCATTTAGCGGTTGGAATTTTGAGCAGTT AAGAGGGCGAGTGAAAGAGGATGAGCTCGACTGGTCTTATCGGGAATGGGTCAAGGAGTCACTTAAGCAACGGACAGTGC TGGATATGGGCACAGGCGGCGGCGAATTTTTGTCTTCGTGTGCTCCATTTCGAGGAAAGGTCTATGCGACAGAGGGGTAT GAGCCCAATGTAGAAATTGCGCAAAAAGCATTAGCTCCGTTTGGCGTCAGTGTACGTTATATAGAAGATGATGACAATCT GCCCTTTTCTGATGAGGCTTTTGACAGCATTATCAACCGTCATGAATCATACAGCGAGCAAGAATTAGCCCGTATATTAA AACCAGGTGGAACGTTTATTACCCAACAGGCTGGCGGTGATGATTGCAAAGAAATCAACGAGGCGCTTTCACTTCCTTTA AATACTGAATTTGCCGAATGGAAGCTGGAAGTGGCCGTTGACCGCTTAGTTGCACACGGCTTCAGCGTTGAAGCTAAGAG GAAGGCTTTTCCAAAGCAGCGTTTTTTTGATATTGGTGCGCTTATTTATTACTTGCGGGCGATTCCCTGGCAAGCACCAG GCTTTTCTGTGGAACGCCATCTGCCCCAGTTGGATCATATCAGCCAGGAAATAAAAAAGAACGGGTATTTTGAAACGACA CAGCATCGATTCATCTTGAAAGCAAGAAAATAA
Upstream 100 bases:
>100_bases TGCTCAAACTAGGGTTTACGTAACAACGGTGCAGAGGACCTCCACATAAATCGGGACAAATCGGCATATATCTGTTTATT TATGGGGAGGAGTCAAAAAG
Downstream 100 bases:
>100_bases AAAGGGCGGCTTTATGCCGTCCTTTCAGACTGTAGACAAACGCTCGCATACTTCGTCGTTGCCTCGGTCATATGCTCATG AACCCCCGTTCTATTCACAT
Product: S-adenosylmethionine (SAM)-dependent methyltransferase
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Family Protein; Methyltransferase Domain Family; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Domain-Containing Protein; Ubiquinone/Menaquinone Biosynthesis Methylase; Methyltransferase Domain-Containing; SAM Methytransferase
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAYSKTFLEQVETAMKQSFSGWNFEQLRGRVKEDELDWSYREWVKESLKQRTVLDMGTGGGEFLSSCAPFRGKVYATEGY EPNVEIAQKALAPFGVSVRYIEDDDNLPFSDEAFDSIINRHESYSEQELARILKPGGTFITQQAGGDDCKEINEALSLPL NTEFAEWKLEVAVDRLVAHGFSVEAKRKAFPKQRFFDIGALIYYLRAIPWQAPGFSVERHLPQLDHISQEIKKNGYFETT QHRFILKARK
Sequences:
>Translated_250_residues MAYSKTFLEQVETAMKQSFSGWNFEQLRGRVKEDELDWSYREWVKESLKQRTVLDMGTGGGEFLSSCAPFRGKVYATEGY EPNVEIAQKALAPFGVSVRYIEDDDNLPFSDEAFDSIINRHESYSEQELARILKPGGTFITQQAGGDDCKEINEALSLPL NTEFAEWKLEVAVDRLVAHGFSVEAKRKAFPKQRFFDIGALIYYLRAIPWQAPGFSVERHLPQLDHISQEIKKNGYFETT QHRFILKARK >Mature_249_residues AYSKTFLEQVETAMKQSFSGWNFEQLRGRVKEDELDWSYREWVKESLKQRTVLDMGTGGGEFLSSCAPFRGKVYATEGYE PNVEIAQKALAPFGVSVRYIEDDDNLPFSDEAFDSIINRHESYSEQELARILKPGGTFITQQAGGDDCKEINEALSLPLN TEFAEWKLEVAVDRLVAHGFSVEAKRKAFPKQRFFDIGALIYYLRAIPWQAPGFSVERHLPQLDHISQEIKKNGYFETTQ HRFILKARK
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 28706; Mature: 28574
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSKTFLEQVETAMKQSFSGWNFEQLRGRVKEDELDWSYREWVKESLKQRTVLDMGTGG CCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GEFLSSCAPFRGKVYATEGYEPNVEIAQKALAPFGVSVRYIEDDDNLPFSDEAFDSIINR HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH HESYSEQELARILKPGGTFITQQAGGDDCKEINEALSLPLNTEFAEWKLEVAVDRLVAHG HHCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC FSVEAKRKAFPKQRFFDIGALIYYLRAIPWQAPGFSVERHLPQLDHISQEIKKNGYFETT CCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCEECC QHRFILKARK CCEEEEEECC >Mature Secondary Structure AYSKTFLEQVETAMKQSFSGWNFEQLRGRVKEDELDWSYREWVKESLKQRTVLDMGTGG CCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GEFLSSCAPFRGKVYATEGYEPNVEIAQKALAPFGVSVRYIEDDDNLPFSDEAFDSIINR HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH HESYSEQELARILKPGGTFITQQAGGDDCKEINEALSLPLNTEFAEWKLEVAVDRLVAHG HHCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC FSVEAKRKAFPKQRFFDIGALIYYLRAIPWQAPGFSVERHLPQLDHISQEIKKNGYFETT CCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCEECC QHRFILKARK CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA