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The map label for this gene is 56963488

Identifier: 56963488

GI number: 56963488

Start: 1850192

End: 1850992

Strand: Direct

Name: 56963488

Synonym: ABC1723

Alternate gene names: NA

Gene position: 1850192-1850992 (Clockwise)

Preceding gene: 56963487

Following gene: 56963489

Centisome position: 42.99

GC content: 47.82

Gene sequence:

>801_bases
ATGATCTCCCTTTTGGCTTATATTGGGATTGGGATAGCGGCACTCCTTTTATACAAGCTGGACAAGCTGACTGCTTCTGG
TATGTGGGCCGCGTGTGTTGTTGGGTGGTTGACAATAACGGGCGTTGGTGTAGGGGGGTTAGTGGTGATTGCCGTTTTCT
TTGGCAGCTCCATTGTATGGGGACGTCTTGACTCTTCAAAAGTGGATGTCGATGTGGTTGCCAAACACGGAGCTCGTGAT
GCATGGCAAGTATTGGCAAATGGTGGCGTTGCTGGTCTTTGCTCGTTGTTGGCTTGGTTGTTTCCTGGCTATGCTGCCTT
TGCCTTTGCTGGATTTATTGGCAGTTTAGCTGGCGCTACTGCCGATACTTGGGCATCGGAGCTTGGAAAATATAGCAGAG
AGAAACCGATCCATCTATTTACTTTGAAGCGCGTTTCTCCTGGTGTATCAGGAGCTGTATCAGCGCTTGGTATGGCTGCC
GCTTTTGCAGGCAGTTTTCTTGTCGCAGCAACGGCGATTTTAATATGGTGGAGATATACGCCGTTGAGCCATATCTGGTT
ACTAGTCTATTCAGCAATCGGCTTTCTCGCCAATTTAGCTGATTCTCTTTTTGGTGCTGCGATTCAAGTGTTGTACCGTT
GCCCTGTTTGCGGGTTAGAGACAGAAAGACTAAACCATTGTGGAGAGAAAACGGAAAAGATAAAAGGGTACCGTGTGGCA
ACAAACGACACGATCAATTTTATTTGTACGTTTACAGGAGCGGCGCTTGGCGTTTTAGCAGTCGCATTGATTGGGCGATA
A

Upstream 100 bases:

>100_bases
TTGCGTTATGTTTCCGTGAACAACTGTTTTCTGATTTGCCAACAGAACCCCATGATGTTCTGATTGACAAGGTCATCTCT
GACGACAGGGTCGATGCTTC

Downstream 100 bases:

>100_bases
CGGGGCGGTTGCGATGGCTGTTAACATAATTGGTGGAACAAGGAGGAAACGCGCATGGCTCATTTAGAACGTTATTCAAG
ACAGCTATTGTTTTCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MISLLAYIGIGIAALLLYKLDKLTASGMWAACVVGWLTITGVGVGGLVVIAVFFGSSIVWGRLDSSKVDVDVVAKHGARD
AWQVLANGGVAGLCSLLAWLFPGYAAFAFAGFIGSLAGATADTWASELGKYSREKPIHLFTLKRVSPGVSGAVSALGMAA
AFAGSFLVAATAILIWWRYTPLSHIWLLVYSAIGFLANLADSLFGAAIQVLYRCPVCGLETERLNHCGEKTEKIKGYRVA
TNDTINFICTFTGAALGVLAVALIGR

Sequences:

>Translated_266_residues
MISLLAYIGIGIAALLLYKLDKLTASGMWAACVVGWLTITGVGVGGLVVIAVFFGSSIVWGRLDSSKVDVDVVAKHGARD
AWQVLANGGVAGLCSLLAWLFPGYAAFAFAGFIGSLAGATADTWASELGKYSREKPIHLFTLKRVSPGVSGAVSALGMAA
AFAGSFLVAATAILIWWRYTPLSHIWLLVYSAIGFLANLADSLFGAAIQVLYRCPVCGLETERLNHCGEKTEKIKGYRVA
TNDTINFICTFTGAALGVLAVALIGR
>Mature_266_residues
MISLLAYIGIGIAALLLYKLDKLTASGMWAACVVGWLTITGVGVGGLVVIAVFFGSSIVWGRLDSSKVDVDVVAKHGARD
AWQVLANGGVAGLCSLLAWLFPGYAAFAFAGFIGSLAGATADTWASELGKYSREKPIHLFTLKRVSPGVSGAVSALGMAA
AFAGSFLVAATAILIWWRYTPLSHIWLLVYSAIGFLANLADSLFGAAIQVLYRCPVCGLETERLNHCGEKTEKIKGYRVA
TNDTINFICTFTGAALGVLAVALIGR

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 27940; Mature: 27940

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLLAYIGIGIAALLLYKLDKLTASGMWAACVVGWLTITGVGVGGLVVIAVFFGSSIVW
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEE
GRLDSSKVDVDVVAKHGARDAWQVLANGGVAGLCSLLAWLFPGYAAFAFAGFIGSLAGAT
ECCCCCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
ADTWASELGKYSREKPIHLFTLKRVSPGVSGAVSALGMAAAFAGSFLVAATAILIWWRYT
HHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLSHIWLLVYSAIGFLANLADSLFGAAIQVLYRCPVCGLETERLNHCGEKTEKIKGYRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEE
TNDTINFICTFTGAALGVLAVALIGR
CCCCEEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISLLAYIGIGIAALLLYKLDKLTASGMWAACVVGWLTITGVGVGGLVVIAVFFGSSIVW
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEE
GRLDSSKVDVDVVAKHGARDAWQVLANGGVAGLCSLLAWLFPGYAAFAFAGFIGSLAGAT
ECCCCCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
ADTWASELGKYSREKPIHLFTLKRVSPGVSGAVSALGMAAAFAGSFLVAATAILIWWRYT
HHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLSHIWLLVYSAIGFLANLADSLFGAAIQVLYRCPVCGLETERLNHCGEKTEKIKGYRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEE
TNDTINFICTFTGAALGVLAVALIGR
CCCCEEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]