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The map label for this gene is yrvM [H]

Identifier: 56963346

GI number: 56963346

Start: 1705766

End: 1706533

Strand: Direct

Name: yrvM [H]

Synonym: ABC1581

Alternate gene names: 56963346

Gene position: 1705766-1706533 (Clockwise)

Preceding gene: 56963343

Following gene: 56963349

Centisome position: 39.63

GC content: 42.97

Gene sequence:

>768_bases
ATGTTGCACCAGTTTTCAAGAAATGAGTTAGCAATCGGCCATGATGGGCTGGAGCGCCTAAAAGGCAGTACAGTTGCTGT
GTTAGGGGTAGGAGGAGTCGGATCCTTTTCGGCAGAAGCGCTAGCCCGTTCTGGCGTCGGTAAAATTGTGCTCGTTGATA
AAGACGATGTCGATATTACGAATGTAAATCGCCAGATCCATGCATTGCTCTCAACAGTTGGCAAGCCAAAAGTTGATTTG
ATGGCTGCGCGGATAAGTGACATCAACCCAAATTGTGAAGTAATTACAAGAAAAATGTTTTATACCGAGGAAACGTATGA
ATCGTTTTTTTCACATAAACTTGACTTCGTCATTGATGCCAGCGACACCATTTCTTATAAAATCCATTTGATTAAACAAT
GTAAGCTGCGGGGGATTCCGATTATATCCAGCATGGGAGTCGCCAATAAAATGGATCCAACTCGTTTAAGGATTGCGGAT
ATTTCCGAAACAAGCTATGACCCCATTGCAAAAGTAATTCGTACGAGGTTACGAAAAGAGGGGATTCATAAAGGCGTCAA
TGTTGTTTTTTCAGATGAGAAACCGATCCAAATTAGGGAAGACATCCGTAAGGAAATTGTACCTGAAACGGCTGAACAAG
GAAACATCCGCAAAGCGAAACTACCGCCGTCTTCAAATGCATTCGTGCCGTCTGTATCAGGCTTGATCATGGCAGGACAT
GTCATCACTCGTTTACTAGAAGGCATAGAAATTAACCGACGTTCTTAA

Upstream 100 bases:

>100_bases
TCTTAATACGAGAAAAAAATCACATACGAGCAGGCGGATTGCGTTCATTTTATGGTATGATCATTCAGTCAGTACAAAGG
CACAAAAGGAGTGGACATCG

Downstream 100 bases:

>100_bases
CTAGTAAGCTCCTACGCTAAAAAACGTAGGAGCTTTCGTCCTTTAGACAAAAACATAGGCAAGAAGCGAATTTACTTTGA
TAGTTTCTCTAAGTTTCCGT

Product: dinucleotide-utilizing enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLHQFSRNELAIGHDGLERLKGSTVAVLGVGGVGSFSAEALARSGVGKIVLVDKDDVDITNVNRQIHALLSTVGKPKVDL
MAARISDINPNCEVITRKMFYTEETYESFFSHKLDFVIDASDTISYKIHLIKQCKLRGIPIISSMGVANKMDPTRLRIAD
ISETSYDPIAKVIRTRLRKEGIHKGVNVVFSDEKPIQIREDIRKEIVPETAEQGNIRKAKLPPSSNAFVPSVSGLIMAGH
VITRLLEGIEINRRS

Sequences:

>Translated_255_residues
MLHQFSRNELAIGHDGLERLKGSTVAVLGVGGVGSFSAEALARSGVGKIVLVDKDDVDITNVNRQIHALLSTVGKPKVDL
MAARISDINPNCEVITRKMFYTEETYESFFSHKLDFVIDASDTISYKIHLIKQCKLRGIPIISSMGVANKMDPTRLRIAD
ISETSYDPIAKVIRTRLRKEGIHKGVNVVFSDEKPIQIREDIRKEIVPETAEQGNIRKAKLPPSSNAFVPSVSGLIMAGH
VITRLLEGIEINRRS
>Mature_255_residues
MLHQFSRNELAIGHDGLERLKGSTVAVLGVGGVGSFSAEALARSGVGKIVLVDKDDVDITNVNRQIHALLSTVGKPKVDL
MAARISDINPNCEVITRKMFYTEETYESFFSHKLDFVIDASDTISYKIHLIKQCKLRGIPIISSMGVANKMDPTRLRIAD
ISETSYDPIAKVIRTRLRKEGIHKGVNVVFSDEKPIQIREDIRKEIVPETAEQGNIRKAKLPPSSNAFVPSVSGLIMAGH
VITRLLEGIEINRRS

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=251, Percent_Identity=34.2629482071713, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI87082356, Length=137, Percent_Identity=29.9270072992701, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1787048, Length=138, Percent_Identity=31.1594202898551, Blast_Score=75, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321790, Length=252, Percent_Identity=35.3174603174603, Blast_Score=150, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6322825, Length=200, Percent_Identity=39.5, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24582879, Length=144, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28171; Mature: 28171

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQFSRNELAIGHDGLERLKGSTVAVLGVGGVGSFSAEALARSGVGKIVLVDKDDVDIT
CCCCCCCCCEEECCHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEE
NVNRQIHALLSTVGKPKVDLMAARISDINPNCEVITRKMFYTEETYESFFSHKLDFVIDA
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCCCEEEEEC
SDTISYKIHLIKQCKLRGIPIISSMGVANKMDPTRLRIADISETSYDPIAKVIRTRLRKE
CCCEEEEEEEEEHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GIHKGVNVVFSDEKPIQIREDIRKEIVPETAEQGNIRKAKLPPSSNAFVPSVSGLIMAGH
HHHCCCEEEECCCCCCHHHHHHHHHHCCCCHHCCCEEEEECCCCCCCCCCCHHHHHHHHH
VITRLLEGIEINRRS
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MLHQFSRNELAIGHDGLERLKGSTVAVLGVGGVGSFSAEALARSGVGKIVLVDKDDVDIT
CCCCCCCCCEEECCHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEE
NVNRQIHALLSTVGKPKVDLMAARISDINPNCEVITRKMFYTEETYESFFSHKLDFVIDA
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCCCEEEEEC
SDTISYKIHLIKQCKLRGIPIISSMGVANKMDPTRLRIADISETSYDPIAKVIRTRLRKE
CCCEEEEEEEEEHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GIHKGVNVVFSDEKPIQIREDIRKEIVPETAEQGNIRKAKLPPSSNAFVPSVSGLIMAGH
HHHCCCEEEECCCCCCHHHHHHHHHHCCCCHHCCCEEEEECCCCCCCCCCCHHHHHHHHH
VITRLLEGIEINRRS
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]