Click here to switch to the map view.

The map label for this gene is 55981708

Identifier: 55981708

GI number: 55981708

Start: 1628973

End: 1629509

Strand: Reverse

Name: 55981708

Synonym: TTHA1739

Alternate gene names: NA

Gene position: 1629509-1628973 (Counterclockwise)

Preceding gene: 55981709

Following gene: 55981698

Centisome position: 88.09

GC content: 67.78

Gene sequence:

>537_bases
ATGGAGAAAATGCTTGCCCGAAAGCCCCTTTCCCTGGAGCGCTACCTGGAGGAGGAGGCGGAAAGCCCCGTGAAGCGGGA
GTTCTACCGGGGCTTCCCCTACGCCATGGCCGGGGCCAGCGCCCTCCACAACCGCGTGGCCCTGAACATCGCCGCCCGCT
TCCTGGAGGCGGCCAGGCCCCGGGGGTGCCGGGTCTACATGAGCGACATGAAGCTCCGCATCCGGGACGAGGCGGTCTAC
TACCCGGACGTGATGGTGGTCTGCGGGGAAGGCCCGCCCCACCCCTACTACGAGGAAGCCCCCTGTGCTGTGGTGGAGGT
CCTCTCCCCCGCCACCGAGGCCTTGGACCGCAGGGAGAAACGGGCCATGTACCTGAGTCTGGATAGCCTCCAGGTCTACC
TCCTGGTGGACCCGGAGAGGCGCCGCTTTACCGCCTACCGCCTCACCCCGGAGGGGTTCGTGGAGGAGGAGGGCGAGGAG
GTGGACGTGCCCTGCCTGGACCTTCGCCTGACCCTGGAGGACGCCTTCCGGCTCTAA

Upstream 100 bases:

>100_bases
CGGCGCAAGCCGGCATGGGGGCCCCGGCAAAGGGTTTTCAAGGGGCTTCCTCGGGCCAGCCGGGCGAAGGAAGCGAAAGG
GGAGGGGGTCCGGAGGTAGC

Downstream 100 bases:

>100_bases
AAGAACTCGGCGAGGAAGCCCAAAAGGGCGGTGCGGAAGGCCTTGGGGTTTTCCAGGTTGGCGAGGTGGCCCGTCTCCGG
GAGGATGAGCATGCGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEKMLARKPLSLERYLEEEAESPVKREFYRGFPYAMAGASALHNRVALNIAARFLEAARPRGCRVYMSDMKLRIRDEAVY
YPDVMVVCGEGPPHPYYEEAPCAVVEVLSPATEALDRREKRAMYLSLDSLQVYLLVDPERRRFTAYRLTPEGFVEEEGEE
VDVPCLDLRLTLEDAFRL

Sequences:

>Translated_178_residues
MEKMLARKPLSLERYLEEEAESPVKREFYRGFPYAMAGASALHNRVALNIAARFLEAARPRGCRVYMSDMKLRIRDEAVY
YPDVMVVCGEGPPHPYYEEAPCAVVEVLSPATEALDRREKRAMYLSLDSLQVYLLVDPERRRFTAYRLTPEGFVEEEGEE
VDVPCLDLRLTLEDAFRL
>Mature_178_residues
MEKMLARKPLSLERYLEEEAESPVKREFYRGFPYAMAGASALHNRVALNIAARFLEAARPRGCRVYMSDMKLRIRDEAVY
YPDVMVVCGEGPPHPYYEEAPCAVVEVLSPATEALDRREKRAMYLSLDSLQVYLLVDPERRRFTAYRLTPEGFVEEEGEE
VDVPCLDLRLTLEDAFRL

Specific function: Unknown

COG id: COG4636

COG function: function code S; Uncharacterized protein conserved in cyanobacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll1609 and sll0925 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 20544; Mature: 20544

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMLARKPLSLERYLEEEAESPVKREFYRGFPYAMAGASALHNRVALNIAARFLEAARP
CCCCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGCRVYMSDMKLRIRDEAVYYPDVMVVCGEGPPHPYYEEAPCAVVEVLSPATEALDRREK
CCCEEEEECCEEEEECCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RAMYLSLDSLQVYLLVDPERRRFTAYRLTPEGFVEEEGEEVDVPCLDLRLTLEDAFRL
HEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHCC
>Mature Secondary Structure
MEKMLARKPLSLERYLEEEAESPVKREFYRGFPYAMAGASALHNRVALNIAARFLEAARP
CCCCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGCRVYMSDMKLRIRDEAVYYPDVMVVCGEGPPHPYYEEAPCAVVEVLSPATEALDRREK
CCCEEEEECCEEEEECCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RAMYLSLDSLQVYLLVDPERRRFTAYRLTPEGFVEEEGEEVDVPCLDLRLTLEDAFRL
HEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]