| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981631
Identifier: 55981631
GI number: 55981631
Start: 1575747
End: 1576226
Strand: Direct
Name: 55981631
Synonym: TTHA1662
Alternate gene names: NA
Gene position: 1575747-1576226 (Clockwise)
Preceding gene: 55981629
Following gene: 55981667
Centisome position: 85.19
GC content: 67.29
Gene sequence:
>480_bases ATGGGAGTGCGTACCTTTTTTGCCCTTCTCGTCCTGGTCCTGGGCGGCCTCTTCGCCTGGCTCAACTGGCCGGAGGTCAC CCGGACGGCCCCCCTCTCCCTGGGGTTCACCCGGGTGGAGGCCCCCCTGGGCCTGGTCCTCCTCGTGGCCTTAGGGGTGG TAACCCTCCTCTACCTCCTCTTCACCCTCGGCCTCGAGACCGCCGCCCTCCTGGAGGTGCGGCGCTACGCTCGGGAACTC CTCCACTACAAAAAGCTCGCGGAGGACGCGGAGCAAAGCCGCTTCACCGAGCTCCGCCGCTACCTGGAAGGGGAGTTCCA GGCCCTAAGGGAGGCGGAGCGTGAGGAGCTTAGGGCCCTGAAGGAGGAGGTGGCGGAAACCCTGGAGAAGCACGGGAACA CCCTCGCCGCCTACATCGGGGAGCTCGAGGACCAGATCCTGCGCCTCCTGGGCGAGCGCAAGCAGGACCCCGGAGGCTAA
Upstream 100 bases:
>100_bases CTTAAAGGCCCGATGAGGCCCCAAAGAAACGCCGCCAGCAGGACGTAAAGGTAGCCCATGGGCCAAGTGTATAATCGGCC CAGAGGTTATTGGAGGCTTT
Downstream 100 bases:
>100_bases GCGCCCGCACCTTGTCTGGACGGCCACGCGCGGACCCTTGGGGAAAGCCCCCGTGCCCCGCCGGCACGGGGTAGCCCAAA GCCCCCCGGGCCGAGGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MGVRTFFALLVLVLGGLFAWLNWPEVTRTAPLSLGFTRVEAPLGLVLLVALGVVTLLYLLFTLGLETAALLEVRRYAREL LHYKKLAEDAEQSRFTELRRYLEGEFQALREAEREELRALKEEVAETLEKHGNTLAAYIGELEDQILRLLGERKQDPGG
Sequences:
>Translated_159_residues MGVRTFFALLVLVLGGLFAWLNWPEVTRTAPLSLGFTRVEAPLGLVLLVALGVVTLLYLLFTLGLETAALLEVRRYAREL LHYKKLAEDAEQSRFTELRRYLEGEFQALREAEREELRALKEEVAETLEKHGNTLAAYIGELEDQILRLLGERKQDPGG >Mature_158_residues GVRTFFALLVLVLGGLFAWLNWPEVTRTAPLSLGFTRVEAPLGLVLLVALGVVTLLYLLFTLGLETAALLEVRRYARELL HYKKLAEDAEQSRFTELRRYLEGEFQALREAEREELRALKEEVAETLEKHGNTLAAYIGELEDQILRLLGERKQDPGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17997; Mature: 17866
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRTFFALLVLVLGGLFAWLNWPEVTRTAPLSLGFTRVEAPLGLVLLVALGVVTLLYLL CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTLGLETAALLEVRRYARELLHYKKLAEDAEQSRFTELRRYLEGEFQALREAEREELRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEEVAETLEKHGNTLAAYIGELEDQILRLLGERKQDPGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GVRTFFALLVLVLGGLFAWLNWPEVTRTAPLSLGFTRVEAPLGLVLLVALGVVTLLYLL CHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTLGLETAALLEVRRYARELLHYKKLAEDAEQSRFTELRRYLEGEFQALREAEREELRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEEVAETLEKHGNTLAAYIGELEDQILRLLGERKQDPGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA