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The map label for this gene is 55981629

Identifier: 55981629

GI number: 55981629

Start: 1574363

End: 1574875

Strand: Direct

Name: 55981629

Synonym: TTHA1660

Alternate gene names: NA

Gene position: 1574363-1574875 (Clockwise)

Preceding gene: 55981613

Following gene: 55981631

Centisome position: 85.11

GC content: 70.96

Gene sequence:

>513_bases
GTGAACCTGGACGCCCCACGGGTCCTGGTCCTCAACGCCGCCTACGAGGTCCTGGGCCTGGCCAGCATCAAGCGGGCCGT
GCTCCTCGTCCTCGGGGGCGGGGCGGAGATGGTCTCGGAAAGCGGCCTCTACCTCAACACCCCCTCCACCCGGATCCCCG
TCCCCAGCGTCGTCCGCCTCAAGCGCATGGTCCGCCGCAGGCCGGGGCGCGTTCCCTTGAACCGCAGAAACGTCCTCCGG
CGCGACCGCTACACCTGCCAGTACTGCGGGCAAAAGGGCGGGGAGCTCACCGTGGACCACGTCCTCCCCAAAAGCCGCGG
GGGCAAGAGCACCTGGGACAACCTGGTGGCCGCCTGCCGCAGCTGCAACCTCAGGAAGGGGGACCGCACCCCCGAGGAGG
CGGGGATGCGCCTCCTCCGCCCCCCGAAGCCCCCGAGGGTGCCCCTCTTCCTTTTGGACCTCAAGGAGGTCCCCCCGGAC
TGGCGGCCCTTCGTGGAGGGCCTCCTCGGCTAG

Upstream 100 bases:

>100_bases
CCAGCCACGAGCCCGAGGGCGAGGATACGCATCAGAAAAGGTCCCATAGAAGCCCCCTCTTTGCCGCTAGCATAGCACAC
CCCTGTGCTAAGCTGAGGCC

Downstream 100 bases:

>100_bases
CGCCGCACCGCAAGAAGCACCGCCAGGATCACGAGCAAAGCCCCGAAATAGCCCAAGGGCGAAAGGACCTCGCCGAAGAG
CAGGTAGGCGAGGACCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNLDAPRVLVLNAAYEVLGLASIKRAVLLVLGGGAEMVSESGLYLNTPSTRIPVPSVVRLKRMVRRRPGRVPLNRRNVLR
RDRYTCQYCGQKGGELTVDHVLPKSRGGKSTWDNLVAACRSCNLRKGDRTPEEAGMRLLRPPKPPRVPLFLLDLKEVPPD
WRPFVEGLLG

Sequences:

>Translated_170_residues
MNLDAPRVLVLNAAYEVLGLASIKRAVLLVLGGGAEMVSESGLYLNTPSTRIPVPSVVRLKRMVRRRPGRVPLNRRNVLR
RDRYTCQYCGQKGGELTVDHVLPKSRGGKSTWDNLVAACRSCNLRKGDRTPEEAGMRLLRPPKPPRVPLFLLDLKEVPPD
WRPFVEGLLG
>Mature_170_residues
MNLDAPRVLVLNAAYEVLGLASIKRAVLLVLGGGAEMVSESGLYLNTPSTRIPVPSVVRLKRMVRRRPGRVPLNRRNVLR
RDRYTCQYCGQKGGELTVDHVLPKSRGGKSTWDNLVAACRSCNLRKGDRTPEEAGMRLLRPPKPPRVPLFLLDLKEVPPD
WRPFVEGLLG

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18960; Mature: 18960

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDAPRVLVLNAAYEVLGLASIKRAVLLVLGGGAEMVSESGLYLNTPSTRIPVPSVVRL
CCCCCCEEEEHHHHHHHHHHHHHHHEEEEEECCCHHHHHCCCEEEECCCCCCCCHHHHHH
KRMVRRRPGRVPLNRRNVLRRDRYTCQYCGQKGGELTVDHVLPKSRGGKSTWDNLVAACR
HHHHHHCCCCCCCCHHHHHHHCCHHHHHHCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHH
SCNLRKGDRTPEEAGMRLLRPPKPPRVPLFLLDLKEVPPDWRPFVEGLLG
CCCCCCCCCCHHHHCCEECCCCCCCCCCEEEEEHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MNLDAPRVLVLNAAYEVLGLASIKRAVLLVLGGGAEMVSESGLYLNTPSTRIPVPSVVRL
CCCCCCEEEEHHHHHHHHHHHHHHHEEEEEECCCHHHHHCCCEEEECCCCCCCCHHHHHH
KRMVRRRPGRVPLNRRNVLRRDRYTCQYCGQKGGELTVDHVLPKSRGGKSTWDNLVAACR
HHHHHHCCCCCCCCHHHHHHHCCHHHHHHCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHH
SCNLRKGDRTPEEAGMRLLRPPKPPRVPLFLLDLKEVPPDWRPFVEGLLG
CCCCCCCCCCHHHHCCEECCCCCCCCCCEEEEEHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA